| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1687 |
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| Symbol | |
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| ID | 4477197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1982069 |
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| End bp | 1983022 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639726270 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_869326 |
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| Protein GI | 117920134 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTCG ATAATCAAGT GGCGTTGGTA ACGGGAGCAG GCTCCGGGCT AGGGAGAGCC
TATGCCATTA TGTTGGCTGA GCGGGGCGCC AAATTGGTAT TAGTTGACCA ACCTAAGGGA
CGTCCATCCC AAGGCGAGGC ATTGAGGGCA ACTAGCTCTT CTAACTTAAC TCAGGTAACT
AACACAGAAC TGCAGCAAAC CCATGAGGCC ATTTTGAAGC TCGGGGGAGA ATGCCTGTAT
TTTGAAGTGG ATGTTAGCCA GCAGGATGAC GTCAAGGCGA TGGTGCATCG CCTACAGCAA
GATTGGCAAC GCGTGGATAT TTTGGTCAAT AACGCCGGGG TTTACGGCGC GTGCTCCTTC
GAGCATATCC AACAAGCCGA CTGGCAGCGA CAGTTTGATG TGGATGTGCA TGGTAGCTTT
TATCTGACTC AAGCAATTTG GCCGCTGATG AAGGCCCATG GCTATGGCCG AATTTTGATG
ATCACTGGGG TGTCGGCGTT GTTTGGTGAC TTACATCAAG TCCCGTTTAG CGCCGCCAAG
ATGGCCCTCG TCGGTATGGT TAACAGCCTT GCTTTAGAGG GCGAGCAATA TAACATCCAT
ATCAATAGTC TGTGCCCGCA GGCACTCACG GCCATGACCC ATAAACACTT AGCGCCAGCG
ATTCAACCGC TGTTTTCCTT TGATACGGTC ACAGCGACCA TGGCATTTTT AGTCAGCCAT
GCCGCACCGA ATGGCCAACA TTTGCTCGCG GGGGCGGGCA GCGTGAGTCA TGGGATGTTT
GCCGAATTTC AGTCCATTTA TTTCAGTGAG GGGCTGTGCA CACCCGATAA ACTGGTCAAG
TACTGGCCTG AGTTGCATTA TGCCTTTCCG ATTAATCTGC ATACCTGCGG CGAAGATAAA
GTGTTGGCTT GGTCAAAACA GAGTGCCCTT GAGCATCATA TTAAGATTGA GTAG
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| Protein sequence | MRFDNQVALV TGAGSGLGRA YAIMLAERGA KLVLVDQPKG RPSQGEALRA TSSSNLTQVT
NTELQQTHEA ILKLGGECLY FEVDVSQQDD VKAMVHRLQQ DWQRVDILVN NAGVYGACSF
EHIQQADWQR QFDVDVHGSF YLTQAIWPLM KAHGYGRILM ITGVSALFGD LHQVPFSAAK
MALVGMVNSL ALEGEQYNIH INSLCPQALT AMTHKHLAPA IQPLFSFDTV TATMAFLVSH
AAPNGQHLLA GAGSVSHGMF AEFQSIYFSE GLCTPDKLVK YWPELHYAFP INLHTCGEDK
VLAWSKQSAL EHHIKIE
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