Gene Shewana3_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1678 
Symbol 
ID4477188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1973404 
End bp1975521 
Gene Length2118 bp 
Protein Length705 aa 
Translation table11 
GC content48% 
IMG OID639726261 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_869317 
Protein GI117920125 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATGT CCATTGTTGC ATTGAGCATC ACGGCGGCCT TATTGGCTGG CTGTGGGAGC 
GATGATAAGA AGGCTCCGGC ACCTGTGCCT AAAGTGAATA CTGCCCCGAC CACGGCGGAT
ATGACTGTTG ATGTGTCACA GTCGATGCTG TTTACTGGAA AACTAGAAGC GAGCGATGCC
GAAGGTGGTT TGACCTATTC ATTGGTTGAC CCAGCCGATC TTAAACTGGG CACCTTTACG
CTAGTGAATA AAAACACTGG CGAATTTACC TATGCATCCG ATGCCAGCGA AGGGACTGAA
GTGGTTCGGT TCAAAGTGTC AGACGGCCAA TTACAGGCTG AAGCCAATCT GACAATCAAT
ATTAAGCATG GCGATCCACT CTTTACCTAC CAATGGCATT TAAAAAACAC CGGGCAGAAT
GCTTTTGCGG CTCACCGCGG TGTGGCTGGT GAAGATATGA ATGTGAGCGG TGCGATTTCA
GATAATGCCA TGGGACAAGG TATTACCGTT GCTGTGGTAG ATGATGGTTT AGAGATTGCG
CACCCAGATT TGATGAACAA CACGGTCAAT GGCGGTTCTT ATAATTTGAT TACCGGCACA
GTTGACCCAA CGCCTTTCTC GGGTGAATCG GGCCATGGTA CCGCCGTTGG TGGAATTATT
GCGGCCGAGG GCTGGAATGG TATCGGCGGT CGTGGTGTTG CACCTAAGGC TAAGTTGATT
GGCTTTAACT TTTTAGACCA AGACCCAACG GGTAAAGTCG AGAACGTTCA AACATTTGAA
AACTTTGCTA AATCACATGG TGCTAGTGCC TATAGTGATA GCGCGCGTGT CTTTAACCAA
AGCTATGGTT ACAGCGTGCC ATTCCCACAT GGTTTTGATG AGGATGAAAC CGAAGTTTAT
CAAGATATTG CAACCCAAAG TTTCGATGGT AAAGGCAGTA TTTTCGTTAA ATCTGCAGGC
AACGGCTATA ACTACTACCG TTACCGCACC TTCTGGTTGC CTGGGGATTA CTTCACTGCA
ACGGCGGAAA AGCCTGCTAA CCATGGCTTA CCTTTCCATA ACTCCAACAT GTCCTCTGAC
AATGCTAACG TGTATAACTT AGTGGTCAGC GCCATTAACG CTAAGGGCGA GCTCTCAAGC
TACTCATCTG TGGGTTCGAA CATTTTCGTC ACTGCACCGG GTGGTGAATA TGGTGATGAC
GATCCAGCAA TTGTGACTAC TGACCGTATG GGATGTGAGA ATGGTTCCGC GATTGCTGAA
GATAGACCGA GCACGCCATT CCACGGTGGG TTGAACCCAT TAAACCCTAA CTGTGACTAC
ACTTCGACCA TGAACGGCAC CTCGTCTGCA GCGCCAAATA CCTCGGGCGC GGTGGCGGTG
ATCATGAGTG CGAATCCAGA TCTCTCTTGG CGTGATGTTC GCTATATCCT CGCCAAGACA
GCAACCAAAG TAGATGCGGA TATTGCGCCT AAAACGGTGA CCATAGGTGA GGGTGAAGCC
GCTCCAGTGT ATACGGCTAT CCCTGGCTGG TTGCAAAACG CGGCTGGGTT CTCTTTCCAT
AACCTCTATG GTTTTGGTCG TGTGGATCTT ACCGAAGCCG TTAAACTGGC TAAATCCTAT
GCCGAAGATT TAGGTGACTA TGTGGTCACT GAGTGGCAAG CAAGCCCTGA ACTCACTAAG
GCTATCCCCG ATGCGGACGT CAATGGTGTG ACTGATACCC AAGTGGTCGC AGACGATTTA
GTGATTGAAG CCGTACAGAT TGAGCTGACT GCCGACCACC TACGTCTACC GGATTTAGCG
GTCGAGCTGA TTTCACCTTC GGGTACTAAG AGTGTGTTGA TGACACCTTA TAACGGTTTA
GTTTACCAAG GTGTGATGGA TAAAACTGAC CCTGATGATC TGGTCACTGG CTACGATGCA
ACTCCTATGT TATCGAATGC CTTCTATGGC GAATCATCAA AAGGTGAATG GACAATCAAG
CTGATTGATG TGAATAGCGG TAGCTATCGA TTTGTTAAAT ACGATCAAGG CTATATCTCT
ATCCCTAACG AAGCCGATGG CAAGCTGAAA GGTTGGTCAA TTCGTTTCCA TGGCCATGCT
GCCAAGTCTG CATCTTAA
 
Protein sequence
MRMSIVALSI TAALLAGCGS DDKKAPAPVP KVNTAPTTAD MTVDVSQSML FTGKLEASDA 
EGGLTYSLVD PADLKLGTFT LVNKNTGEFT YASDASEGTE VVRFKVSDGQ LQAEANLTIN
IKHGDPLFTY QWHLKNTGQN AFAAHRGVAG EDMNVSGAIS DNAMGQGITV AVVDDGLEIA
HPDLMNNTVN GGSYNLITGT VDPTPFSGES GHGTAVGGII AAEGWNGIGG RGVAPKAKLI
GFNFLDQDPT GKVENVQTFE NFAKSHGASA YSDSARVFNQ SYGYSVPFPH GFDEDETEVY
QDIATQSFDG KGSIFVKSAG NGYNYYRYRT FWLPGDYFTA TAEKPANHGL PFHNSNMSSD
NANVYNLVVS AINAKGELSS YSSVGSNIFV TAPGGEYGDD DPAIVTTDRM GCENGSAIAE
DRPSTPFHGG LNPLNPNCDY TSTMNGTSSA APNTSGAVAV IMSANPDLSW RDVRYILAKT
ATKVDADIAP KTVTIGEGEA APVYTAIPGW LQNAAGFSFH NLYGFGRVDL TEAVKLAKSY
AEDLGDYVVT EWQASPELTK AIPDADVNGV TDTQVVADDL VIEAVQIELT ADHLRLPDLA
VELISPSGTK SVLMTPYNGL VYQGVMDKTD PDDLVTGYDA TPMLSNAFYG ESSKGEWTIK
LIDVNSGSYR FVKYDQGYIS IPNEADGKLK GWSIRFHGHA AKSAS