Gene Shewana3_1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1671 
Symbol 
ID4477181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1962950 
End bp1964557 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content54% 
IMG OID639726254 
Productcarboxyl transferase 
Protein accessionYP_869310 
Protein GI117920118 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCAAT TAAGCAGTCG TATCAACGCC CGTAGCGATG AATTTAAAGC CAAATCCGAT 
GATATGGCCG CCCTAGTGGC CGATCTTAAA ACCAAACTCG CCAAAATTGA ACTTGGCGGC
GGCCCCGTTG CCCTAGAGCG CCATTTGGCC CGCGGCAAAC TCCTTCCCCG TCAACGGGTT
GAGAAACTCC TCGACGCTGG TTCGCCCTTT TTAGAACTGT CCCAGTTCGC CGCCTTCGAC
GTTTACGATG AAGAAGTACC CGCCGCAGGA ATTATCGCCG GTATCGGCCG AGTGAGCGGC
GTAGAGTGCA TGATTATCGC CAACGATGCC ACGGTCAAAG GCGGCACTTA CTACCCTATC
ACGGTCAAAA AACACTTAAG GGCACAAGAG ATTGCCAGCC GCTGTCATCT GCCCTGCATC
TATTTAGTCG ACTCTGGCGG CGCTAACTTG CCCCGTCAGG ATGAAGTCTT CCCGGATCGC
GACCATTTCG GCCGGATTTT CTACAACCAA GCACAAATGT CCGCCAAGGG CATTCCGCAA
ATTGCGGTGG TGATGGGTCT GTGTACCGCG GGCGGCGCCT ATGTGCCTGC CATGGCCGAT
GAATCTATTA TAGTTAAAGA ACAAGGCACT ATCTTTTTAG CTGGGCCGCC GTTAGTTAAA
GCCGCGACCG GTGAGGAAGT CAGCGCCGAA GAACTCGGCG GCGCCGACGT ACACACTAAA
ATTTCGGGTG TAGCGGACCA CTTAGCCCAA AACGATGAGC ATGCCTTAGA GCTTGCCCGC
CGCGCTGTGC TGCGTCTGAA TCATCAAAAA CAAATCAATA GTCTGCTGAG CCCAGTTAAG
CCACCTAAGT TTGATATCAG CGAACTCTAT GGCATTGTCG GCACCGACTT GAAAAAGCCC
TTCGATGTGA AAGAAGTGAT CGCCCGCATC GTCGACGACT CCGATTTCGA TGAGTTTAAG
GCCAACTATG GCGCTACTTT AGTCTGTGGT TTTGCCCGTA TTCACGGTTA TCCCGTAGGG
ATTGTGGCCA ACAATGGCAT TTTATTCTCC GAATCAGCGC AAAAAGGCGC GCACTTTATC
GAACTGTGCT GCCAGCGCAA GATACCGCTG CTGTTCCTGC AAAACATCAC CGGCTTTATG
GTGGGTAAAA AGTACGAACA CGAAGGTATC GCTAAGCACG GCGCCAAGAT GGTGACCGCA
GTCTCCTGCG CCAATGTGCC TAAATTCACT GTGATTATCG GTGGCAGCTA CGGCGCGGGT
AACTACGGTA TGTGTGGCCG CGCCTTCGAA CCAACCATGA TGTGGATGTG GCCCAATGCG
CGCATCTCTG TGATGGGTGG CGAGCAAGCC GCAGGCGTAT TAGCCACAGT GCGCCGCGAC
GGCTTAGCCC GTAAAGGCGA AGAATGGTCT GCTGAGGATG AAAAGGCCTT CAAGGCGCCG
ATTATTGCCC AGTACGATAA AGAGGGTCAT CCCTACCATG CCAGCGCCCG CCTGTGGGAT
GACGGCATTA TCGACCCGGC GCAAACCCGT GATGTGGTGG GCCTTGCCCT GTCAGCCGCA
TTAAATGCCC CTATCGAAGA CACCCGCTTC GGCGTCTTCC GTATGTAA
 
Protein sequence
MTQLSSRINA RSDEFKAKSD DMAALVADLK TKLAKIELGG GPVALERHLA RGKLLPRQRV 
EKLLDAGSPF LELSQFAAFD VYDEEVPAAG IIAGIGRVSG VECMIIANDA TVKGGTYYPI
TVKKHLRAQE IASRCHLPCI YLVDSGGANL PRQDEVFPDR DHFGRIFYNQ AQMSAKGIPQ
IAVVMGLCTA GGAYVPAMAD ESIIVKEQGT IFLAGPPLVK AATGEEVSAE ELGGADVHTK
ISGVADHLAQ NDEHALELAR RAVLRLNHQK QINSLLSPVK PPKFDISELY GIVGTDLKKP
FDVKEVIARI VDDSDFDEFK ANYGATLVCG FARIHGYPVG IVANNGILFS ESAQKGAHFI
ELCCQRKIPL LFLQNITGFM VGKKYEHEGI AKHGAKMVTA VSCANVPKFT VIIGGSYGAG
NYGMCGRAFE PTMMWMWPNA RISVMGGEQA AGVLATVRRD GLARKGEEWS AEDEKAFKAP
IIAQYDKEGH PYHASARLWD DGIIDPAQTR DVVGLALSAA LNAPIEDTRF GVFRM