| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1666 |
|---|
| Symbol | |
|---|
| ID | 4477176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 1957549 |
|---|
| End bp | 1958205 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639726249 |
|---|
| Product | butyryl-CoA:acetate CoA transferase |
|---|
| Protein accession | YP_869305 |
|---|
| Protein GI | 117920113 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
|---|
| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTAT CAAGAGAACA ACTGGCACAG CGCGTTGCCA AAGAATTACA AGACGGCTAC
TACGTCAACC TCGGTATTGG CATTCCCACG CTAGTGGCTA ACTATATTCC CGCAGGAATG
GAAGTGATGC TGCAATCGGA AAACGGCCTG CTCGGCATGG GGGAATTTCC GACAGAAGAA
ACCATAGATC CGGATTTAAT TAACGCCGGC AAACAAACCG TTACCGCAGT AAAAGGTGCC
TCGTTTTTCT CCTCCGCCGA AAGCTTTGCG ATGATCCGTG GCGGCCATGT GGACTTAACC
GTACTCGGCG CCTTTGAGGT CGATGTGAAT GGTTCCATCG CCTCATGGAT GATCCCAGGT
AAGCTTATCA AGGGCATGGG CGGCGCAATG GATTTAGTGG CGGGCGCGGA AAATATTATC
GTGACTATGA TGCACGCCGA TAAGTACGGT AACTCTAAGC TGTTACCCGT GTGCGAATTG
CCCCTCACAG GTTACGGCTG TATCAAACGT GTTGTTACCG ATTTAGCCTT TATCGAGATT
AAAGATGGCG CCTTTCATCT GTTAGAACGC GCACCGGGTG TCAGCGTTGA AGAAATTGTT
AGCAAAACCG CTGGCAAATT AATTGTGCCA GACCATGTAC CAGAGATGGT GTTTTAA
|
|---|
| Protein sequence | MALSREQLAQ RVAKELQDGY YVNLGIGIPT LVANYIPAGM EVMLQSENGL LGMGEFPTEE
TIDPDLINAG KQTVTAVKGA SFFSSAESFA MIRGGHVDLT VLGAFEVDVN GSIASWMIPG
KLIKGMGGAM DLVAGAENII VTMMHADKYG NSKLLPVCEL PLTGYGCIKR VVTDLAFIEI
KDGAFHLLER APGVSVEEIV SKTAGKLIVP DHVPEMVF
|
|---|
| |