| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1658 |
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| Symbol | |
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| ID | 4476113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1948635 |
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| End bp | 1949717 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726241 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_869297 |
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| Protein GI | 117920105 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000232607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TCATAATTAT CATCGCCATT TTGGCTGCGG GCTGGTTTGG ATACCAAAGT
ATGCAACCCC AAGCACCTCA GCAAGCAAAA GTTAAGCTCA CCCCTAATGT GGTCATCGCG
ATGGCCGCCA TGGCCCCAGT GCGTGACGAA GTCGAAGCCA TAGGCACCAA CAAGGCCTTT
GAGTCAGTCA CTATCACGCC TAAGGTCACC GATGTAGTCA CCTCACTCAA GTTTGATGAT
GGAGATATCG TCAAGAAGGG CGACTTATTG GTGCAGTTGC AAAATGCCGA GCAGATAGCC
AAAGTGAAAG TGGCGCAGGT GAAGGTGAGC GACAACCAGC GCGAATTAGC GCGGATCAGC
TCTTTGGTTA CTAGCCGCAC TGTGGCGGAG CTAGAGCGTG ACCGCCTGCA AACCTTAATC
GATACCACCC GCGCCGAGTT AGAGCAGGCA CAATCATCCC TCAATGATCG CAGCATAGTG
GCGCCTTTTA ATGGCCGTTT GGGTCTGCGC CAAGTGAGTG TGGGTAGCCT AGTGACTCCG
GGGACTGAGA TCACCACACT CGATGATATT TCTAAGATTA AATTAGACTT TTCGGTGCCT
GAGCGCTTTA TTCAAGACCT ACAGCCCGGC AAGCAAGTCG AAGCCAAAGC CGTGGCGTTC
CCCGATGAAA TCTTTAAAGG CAAAGTGATT TCTATCGATA GCCGTGTAAA CCCAACCACT
CGCGCCGTGA TTGTACGAGC CGAAATCCCA AATCCTGATT TACGTTTACT GCCCGGCATG
CTGATGAAGG TGAAACTCAT CAAGCGCAGC CGCGAAGCTT TGATGCTGCC TGAGTCGGCG
ATTATCCCGA TCCAAAAAGA GCACTTTGTT TACAGCGTCA ATAAGGACAA TGTGATTGAG
CGTAAGCAAG TCACCATTGG TATTCGTACC CGCGGTTGGG TCGAAATCCT CGGTGGTTTA
GAGATTGGTG AAAATGTGGT GATCCGCGGG CTACTCAAAG TGCACCCAGG CGATGTGGTC
AAAACCGAAT TGGCCGAGAA GTTTAGCTAT CTTTCCGATG CTAATACGGA GCCAAGTGTA
TGA
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| Protein sequence | MKKIIIIIAI LAAGWFGYQS MQPQAPQQAK VKLTPNVVIA MAAMAPVRDE VEAIGTNKAF
ESVTITPKVT DVVTSLKFDD GDIVKKGDLL VQLQNAEQIA KVKVAQVKVS DNQRELARIS
SLVTSRTVAE LERDRLQTLI DTTRAELEQA QSSLNDRSIV APFNGRLGLR QVSVGSLVTP
GTEITTLDDI SKIKLDFSVP ERFIQDLQPG KQVEAKAVAF PDEIFKGKVI SIDSRVNPTT
RAVIVRAEIP NPDLRLLPGM LMKVKLIKRS REALMLPESA IIPIQKEHFV YSVNKDNVIE
RKQVTIGIRT RGWVEILGGL EIGENVVIRG LLKVHPGDVV KTELAEKFSY LSDANTEPSV
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