| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1649 |
|---|
| Symbol | |
|---|
| ID | 4476104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 1940023 |
|---|
| End bp | 1941492 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639726232 |
|---|
| Product | peptidase M48, Ste24p |
|---|
| Protein accession | YP_869288 |
|---|
| Protein GI | 117920096 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGTAATT TGACGTTTTT GACCCGATGT AAACCCCTTG CGGCGAGTGT ACTTTCATTA
ATGTTACTCG GTGGAGCCGC AAAGAGTTTT GCCAACAACG ACTTGCCCGA CTTGGGCACC
GCCGCCGTCA ATACCTTCAG CCTAGAAAAA GAAATGGTCT ATGGCGATGC CTACATGCGC
GTTATTCGCT CATCGGCGCC GATGCTGAAC GATCCGGTAT TGAGCCAATA TTTGACTGAA
CTGGGCAACA AACTGGTCGC CCATGCCACG GGAGTCAAAA CGCCCTTTTA TTTCTTCTTA
CTGCAAAACG ATGAGATCAA CGCCTTCGCC TTCTTCGGCG GCCACGTTGC AGTACACACA
GGGCTATTCC TTAACGCCGA TAACGAAAGT GAGCTGGCCT CAGTGCTCGG CCACGAAATT
ACCCACGTGA CCCAACGTCA CTTGGCGCGC TCCCTCGAAG CGCAGCAAAA AAGTGGTCCA
GCGACCGTTG CAGGACTACT GGGGGCGATT TTATTAACCA TCGCCGTGCC TCAGGCGGGG
ATGGCCGCGC TGGCAACCAC TCAAGCCATG GCGACCCAAT CAAAAATCAA CTATACCCGT
CTGCATGAAA AAGAAGCCGA CCGGATTGGC ATGCAGATTT TGGTCGATGC GGGCTTTGAC
CCCAATGCGG CCGCAGATTT CTTTGGTAAA CTCGCCAGTC GCTACCGTTT TACCACCACG
CCGCCGCAAA TGTTGCTGAC TCACCCATTA CCCGAGTCAC GGATCTCCGA GGCGCGGGAT
CGCGCCCACC AGTATCCACA CCGCTATGTG CCGGATAATC TCAACTTCCA GCTCGCCAAA
GCCCGTATTC AGGTGCGTTT TTCCAGTTAC AGCGACGATG CGGTATTGAG CATGTTTGAA
AAGCAGCTCA ATAAGCAAAC CTACGGCTTT AAAGAGGCCG CGCTCTACGG CAAAGCCTTA
GCGCTGTTTA GATTGAAGAA ATTTGATGAG TCCGAAAAGA TTATCGATGA GCTATTAAAA
ATCGATGATA ACAACTTGTT TTATATCGAT ACTAAGACGG ATTTGCTCAA CGAGCGCAAG
GATTTTGCTC AGGCGACTAA GTTACTCGAA GCCCAGCGTA AGATGAAACC CACATCGCAG
GTGATTAACG CGAACTTGGC CAATATCTAT ATTGAGGCCG GAGAGCCAGC TAAGGCTATC
CCACTGCTGG AAGACATGAT TTTCCTCGAT AAGCAAAATC AACTTCCCTA TCAACTGCTC
AATCTTGCCT ATAAAAAATT GGGCAATCAG GGCATGGAGT ATTTTTCCAA TGCCGAGTTA
ATGGCGCTAG GCGCTAACTA TAAGGGCGCT ATCGATCAAT TGAACTTTGC CTACCGCGCT
TCGGAAGGCA ATCCATTACA GCTGGCACGA ATCGAAGCAC GTATCCGCCA ATTTAAACAA
GCGGATAAAG AGATGGATGC CCTGAAGTAA
|
|---|
| Protein sequence | MRNLTFLTRC KPLAASVLSL MLLGGAAKSF ANNDLPDLGT AAVNTFSLEK EMVYGDAYMR
VIRSSAPMLN DPVLSQYLTE LGNKLVAHAT GVKTPFYFFL LQNDEINAFA FFGGHVAVHT
GLFLNADNES ELASVLGHEI THVTQRHLAR SLEAQQKSGP ATVAGLLGAI LLTIAVPQAG
MAALATTQAM ATQSKINYTR LHEKEADRIG MQILVDAGFD PNAAADFFGK LASRYRFTTT
PPQMLLTHPL PESRISEARD RAHQYPHRYV PDNLNFQLAK ARIQVRFSSY SDDAVLSMFE
KQLNKQTYGF KEAALYGKAL ALFRLKKFDE SEKIIDELLK IDDNNLFYID TKTDLLNERK
DFAQATKLLE AQRKMKPTSQ VINANLANIY IEAGEPAKAI PLLEDMIFLD KQNQLPYQLL
NLAYKKLGNQ GMEYFSNAEL MALGANYKGA IDQLNFAYRA SEGNPLQLAR IEARIRQFKQ
ADKEMDALK
|
|---|
| |