Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1642 |
Symbol | |
ID | 4476097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1933481 |
End bp | 1934563 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639726225 |
Product | hypothetical protein |
Protein accession | YP_869281 |
Protein GI | 117920089 |
COG category | [S] Function unknown |
COG ID | [COG3249] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.03169 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAAT TCCTATTAAA GCCAAGCTTA CTCGCGTTTT TATACTGCCT GTTTACCGTT AATAGCCTGC AAGCTGTTGA AGTGAGTAAA TTAGATGAAG CCGATGTGCC CGTGGCTTCC CGCGCCGTGC CTGAGCGGAA TAAAGCCCTT AAAGCCGCGC TGGAAAAAGT GATCATTAAA AATACCGGGA CAGCACGTTC TTTGGATAAC GGCGTTATCC AATCACAACT GGCCAATCCC GATGCACTGC TGAGCCAATA TGGTTATGTG GAGCAAAATG GCCAACTGCT GTTAAAAGCC AACTTTGAGC ATCGCCGCAT TATTACCCTG TTACGTCAGG CCCAATTACC CGTGTGGGGC ATTCAACGTC CACTGACACT CTTTTGGGTT GCCATGCCAA GTGAAGGCGA CACGATTTTA CTGAGTGATT CATCGACCTT AGCCGAGCGT CAGGCATTCA ATACCTTTTC CGATGAGCGC GGCATTCCCG TCTTGCTGCC TATTCTCGAC CTCGATGAGT TAATGGGCAT CAATCCAAAT GATGTTAAAG GCATGTTTGC CGATATCGTG GCCAGTGTCT CTGGGCGTTA TCAAGCCGAC TTCTTAGCTC TGGTCGCTAT TGAACCAGCT GGAAACCAAG TGCGTTATCG CTTGAATTTG TACACCAAGG CCACGATCGA CTCGTTAACG CCGCCACTGT TTAGTTTTAA TGGCTCGGCA GAAAATAGCG CGCAGGCGAT CACCGCTATG ATGGCCGCCC TCGGCGATTA TTATTTCACT AAGTACGCCA TTGCCGATTC CGGTGAACAG GTCGGTGCCA GTGTGACCTT CGTGAACATT GATAAAATGG CGCAGCTAGT TGAAGTGGAA AAATACTTAA AGCAACTCAG CGCTGTGAAG AATGCGACGC TGTCGCGCAT CCAAGGTAAT ACCGCGACGT TTTCCTTGGA TTTATTTGGT TCTCAGACCG ACTTTGAGCG TTTACTAAGT CTAGAGCCGC GAATTTCGGT GGTGGCGCCA GGGGAGTTTT CTGCCGGTGC CAGCCCAGCG GGTAAAACTG TCTATCAATG GCGGTTACCT TAA
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Protein sequence | MLKFLLKPSL LAFLYCLFTV NSLQAVEVSK LDEADVPVAS RAVPERNKAL KAALEKVIIK NTGTARSLDN GVIQSQLANP DALLSQYGYV EQNGQLLLKA NFEHRRIITL LRQAQLPVWG IQRPLTLFWV AMPSEGDTIL LSDSSTLAER QAFNTFSDER GIPVLLPILD LDELMGINPN DVKGMFADIV ASVSGRYQAD FLALVAIEPA GNQVRYRLNL YTKATIDSLT PPLFSFNGSA ENSAQAITAM MAALGDYYFT KYAIADSGEQ VGASVTFVNI DKMAQLVEVE KYLKQLSAVK NATLSRIQGN TATFSLDLFG SQTDFERLLS LEPRISVVAP GEFSAGASPA GKTVYQWRLP
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