Gene Shewana3_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1642 
Symbol 
ID4476097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1933481 
End bp1934563 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content49% 
IMG OID639726225 
Producthypothetical protein 
Protein accessionYP_869281 
Protein GI117920089 
COG category[S] Function unknown 
COG ID[COG3249] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.03169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAT TCCTATTAAA GCCAAGCTTA CTCGCGTTTT TATACTGCCT GTTTACCGTT 
AATAGCCTGC AAGCTGTTGA AGTGAGTAAA TTAGATGAAG CCGATGTGCC CGTGGCTTCC
CGCGCCGTGC CTGAGCGGAA TAAAGCCCTT AAAGCCGCGC TGGAAAAAGT GATCATTAAA
AATACCGGGA CAGCACGTTC TTTGGATAAC GGCGTTATCC AATCACAACT GGCCAATCCC
GATGCACTGC TGAGCCAATA TGGTTATGTG GAGCAAAATG GCCAACTGCT GTTAAAAGCC
AACTTTGAGC ATCGCCGCAT TATTACCCTG TTACGTCAGG CCCAATTACC CGTGTGGGGC
ATTCAACGTC CACTGACACT CTTTTGGGTT GCCATGCCAA GTGAAGGCGA CACGATTTTA
CTGAGTGATT CATCGACCTT AGCCGAGCGT CAGGCATTCA ATACCTTTTC CGATGAGCGC
GGCATTCCCG TCTTGCTGCC TATTCTCGAC CTCGATGAGT TAATGGGCAT CAATCCAAAT
GATGTTAAAG GCATGTTTGC CGATATCGTG GCCAGTGTCT CTGGGCGTTA TCAAGCCGAC
TTCTTAGCTC TGGTCGCTAT TGAACCAGCT GGAAACCAAG TGCGTTATCG CTTGAATTTG
TACACCAAGG CCACGATCGA CTCGTTAACG CCGCCACTGT TTAGTTTTAA TGGCTCGGCA
GAAAATAGCG CGCAGGCGAT CACCGCTATG ATGGCCGCCC TCGGCGATTA TTATTTCACT
AAGTACGCCA TTGCCGATTC CGGTGAACAG GTCGGTGCCA GTGTGACCTT CGTGAACATT
GATAAAATGG CGCAGCTAGT TGAAGTGGAA AAATACTTAA AGCAACTCAG CGCTGTGAAG
AATGCGACGC TGTCGCGCAT CCAAGGTAAT ACCGCGACGT TTTCCTTGGA TTTATTTGGT
TCTCAGACCG ACTTTGAGCG TTTACTAAGT CTAGAGCCGC GAATTTCGGT GGTGGCGCCA
GGGGAGTTTT CTGCCGGTGC CAGCCCAGCG GGTAAAACTG TCTATCAATG GCGGTTACCT
TAA
 
Protein sequence
MLKFLLKPSL LAFLYCLFTV NSLQAVEVSK LDEADVPVAS RAVPERNKAL KAALEKVIIK 
NTGTARSLDN GVIQSQLANP DALLSQYGYV EQNGQLLLKA NFEHRRIITL LRQAQLPVWG
IQRPLTLFWV AMPSEGDTIL LSDSSTLAER QAFNTFSDER GIPVLLPILD LDELMGINPN
DVKGMFADIV ASVSGRYQAD FLALVAIEPA GNQVRYRLNL YTKATIDSLT PPLFSFNGSA
ENSAQAITAM MAALGDYYFT KYAIADSGEQ VGASVTFVNI DKMAQLVEVE KYLKQLSAVK
NATLSRIQGN TATFSLDLFG SQTDFERLLS LEPRISVVAP GEFSAGASPA GKTVYQWRLP