| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1638 |
|---|
| Symbol | |
|---|
| ID | 4476093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 1928568 |
|---|
| End bp | 1930502 |
|---|
| Gene Length | 1935 bp |
|---|
| Protein Length | 644 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639726221 |
|---|
| Product | putative serine protein kinase, PrkA |
|---|
| Protein accession | YP_869277 |
|---|
| Protein GI | 117920085 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2766] Putative Ser protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00112496 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.606435 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATTT TCGAGCATTA CCAAAAGCGC TACGAACAAA AACTCGATGA AGAATACACT
TTGCAAGAAT ACCTCGATAT CTGCAAAGAA GATCGCAGTG CTTATATGTC AGCGTCCGAG
CGATTACTGC TTGCCATCGG CGAAGCCGAA ATTATTGATA CCGCGAAAAA TCCAACCCTA
AGCCGTATCT TTTCGAATCG TCTCATCTCA CGCTATCCCG CCTTTAAAGA CTTTTACGGT
ATGGAAGATG CGATTGAACA AATCGTCGCC TACCTAAAAC ACTCGGCCCA AGGCTTAGAG
GAATCGAAGC AAATTTTGTA CTTACTCGGC CCAGTGGGTG GCGGTAAGTC ATCATTGGCG
GAAAAACTCA AAGCCTTGAT GCAAAAAGTG CCAATTTACA TTCTCAGTGC TAATGGCGTG
AGAAGCCCGG TGAATGACCA CCCCTTCTGT CTCTTCGATG TCGAAGAAGA CGGCCAGCTG
CTGCGGGATG AGTTTAATAT TCCCACCCGT TATCTTAAAA CCATTATGTC GCCTTGGGCG
GTGAAACGTC TGCATGAGTT TGGCGGCGAT ATTTCAAAAT TCCGCGTGGT CAAGGTCTAT
CCCTCTATCC TCGACCAATT GGCGATTGCC AAAACCGAAC CTGGGGATGA AAACAACCAA
GATATTTCCT CCCTGGTCGG TAAGGTTGAT ATTCGTCAGC TAGAACATTT CTCGCAGGAC
GATGCCGATG CTTACGCCTA CTCGGGTGCA CTGTGCCGTG CAAACCAAGG GATGATGGAG
TTCGTGGAAA TGTTCAAGGC GCCGATTAAG GTGCTACACC CACTGCTCAC CGCTACCCAA
GAAGGTAACT ATAACGGCAC CGAAGGCTTA TCCGCCCTGC CTTATAGCGG TATCATTTTG
GCGCACTCTA ACGAATCAGA ATGGTCAACC TTCAAAAACA ATAAGAACAA TGAAGCGTTT
CTCGACAGGG TTTATATCGT CAAAGTGCCC TATTGTCTGC GGGTATCGGA AGAATTGCAG
ATTTACAAAA AATTACTGCA AAACTCCGAG CTGTCCCAAG CCCCTTGCGC ACCTGGCACC
TTAGAAACCC TAGCGCAATT TAGTGTGCTC TCGAGGATAA AAACACCTGA AAACTCCTCC
ATCTACTCTA AGATGCGGGT CTATGATGGT GAAAGCCTTA AAGATACCGA TCCTAAAGCC
AAATCCTACC AAGAGTACCG CGACTACGCA GGTGTTGATG AAGGTATGAA CGGTCTTTCT
ACCCGTTTCG CCTTCAAGAT CCTGTCGCGG GTATTTAACT TTGACCACTC AGAGATTGCC
GCTAACCCTG TCCATTTGTT CTATGTACTC GAACGCCAAA TCGAGCAGGA ACAATTCCCC
GGCGATACCG CCGAACGTTA TCTGGAGTTC TTAAAAGGCT ATTTGATCCC TAAATACGTC
GAATTTATCG GTAAGGAAAT CCAAACCGCG TACTTAGAGT CCTACTCTGA ATACGGCCAA
AATATCTTCG ACCGTTATGT CACCTACGCC GATTTCTGGA TCCAAGATCA GGAATACCGT
GACCCCGAAA CTGGCCAATT GTTTGACCGC TCCGCACTGA ATGCCGAACT GGAGAAAATC
GAAAAACCCG CGGGGATCAG CAACCCTAAA GATTTCCGTA ATGAGATCGT TAACTTTGTC
CTGCGCGCCC GCGCAAGCCA TGAGGGCAAC AACCCACTCT GGACCAGCTA CGAAAAACTA
CGCACTGTAA TTGAGAAGAA AATGTTCTCA AATACAGAGG ACTTATTGCC TGTAATTTCC
TTTAACGCCA AAACCTCGAC TGACGATCAA CGTAAACACG ATGATTTTGT TAATCGAATG
ATGGAGAAAG GCTATACCAA AAAACAAGTC AGACTGCTGT CTGAGTGGTA TTTACGGGTT
CGTAAATCCT CTTAA
|
|---|
| Protein sequence | MGIFEHYQKR YEQKLDEEYT LQEYLDICKE DRSAYMSASE RLLLAIGEAE IIDTAKNPTL
SRIFSNRLIS RYPAFKDFYG MEDAIEQIVA YLKHSAQGLE ESKQILYLLG PVGGGKSSLA
EKLKALMQKV PIYILSANGV RSPVNDHPFC LFDVEEDGQL LRDEFNIPTR YLKTIMSPWA
VKRLHEFGGD ISKFRVVKVY PSILDQLAIA KTEPGDENNQ DISSLVGKVD IRQLEHFSQD
DADAYAYSGA LCRANQGMME FVEMFKAPIK VLHPLLTATQ EGNYNGTEGL SALPYSGIIL
AHSNESEWST FKNNKNNEAF LDRVYIVKVP YCLRVSEELQ IYKKLLQNSE LSQAPCAPGT
LETLAQFSVL SRIKTPENSS IYSKMRVYDG ESLKDTDPKA KSYQEYRDYA GVDEGMNGLS
TRFAFKILSR VFNFDHSEIA ANPVHLFYVL ERQIEQEQFP GDTAERYLEF LKGYLIPKYV
EFIGKEIQTA YLESYSEYGQ NIFDRYVTYA DFWIQDQEYR DPETGQLFDR SALNAELEKI
EKPAGISNPK DFRNEIVNFV LRARASHEGN NPLWTSYEKL RTVIEKKMFS NTEDLLPVIS
FNAKTSTDDQ RKHDDFVNRM MEKGYTKKQV RLLSEWYLRV RKSS
|
|---|
| |