Gene Shewana3_1637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1637 
Symbol 
ID4476092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1927234 
End bp1928508 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content47% 
IMG OID639726220 
Producthypothetical protein 
Protein accessionYP_869276 
Protein GI117920084 
COG category[S] Function unknown 
COG ID[COG2718] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00171589 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.194153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTATGG CGAACTTTAT CGATAGACGG TTGAATGCGA AAGGAAAAAG CACAGTCAAC 
CGCCAACGCT TTATCAACCG ATATAAGCAA CAAATCAAAA AAGCCGTCAG CGATGCCGTC
ACGCGTCGCA GTGTAACGGA TGTAGATAAA GGCGAAAAAA TCAGTATTCC CACACGGGAT
ATCAGTGAAC CTATGTTCCA TCAAGGCAAA GGAGGCGTAA GAGACAGAGT CCACCCAGGC
AATGATCAAT TCACCCGCGG CGATAAAATC GACAGACCTC AAGGCGGCGC TGGCGGTGGA
GCGGGTAAAG GCGATGCCTC GGATTCGGGC GAAGGTAATG ATGACTTTGT GTTTGAAATC
TCAAAGGATG AATACCTAGA GCTGCTCTTT GAGGACTTAG AACTACCCAA TCTGCAGAAG
AATCGCTTAA ACAAGCTCGT CGAGTATCAA ATCTACCGTG CGGGTTTCAC CAATGATGGT
GTACCAGCCA ATATCAATAT TGTGCGCTCG CTGCGTTCCT CCTTGGCGCG CCGCATCGCC
ATGTCGGCAA GTAAAAAGAA ATTGCTCAAA GAGTTAGAGC AAGAACTGGC GGAGCTTGAA
AATATACCTG GCACTAAAGC CGAACTGATT TTGGATTTAA AAGCCCAAAT TGAGGCGCTC
AAGCAGAAGA TTGCTAAAGT CCCCTTTATC GATACCTTTG ACTTACGTTT CAATAACTTT
GCAAGGCGCG AGGTACCCTC GAGTCAAGCG GTCATGTTCT GCTTAATGGA CGTGTCAGGT
TCGATGGATC AAGCGACAAA GGATATGGCT AAACGTTTCT ATATCTTGCT GTACTTGTTT
CTCACCCGAA CCTACAAAAA CCTCGAGGTG GTCCATATCC GCCACCATAC CCAGGCGAAG
GAAGTGGACG AGCATGAGTT CTTCTACTCC CAAGAAACTG GCGGCACGAT TGTCTCAAGC
GCATTGAAAT TAATGCACGA AATTCAGCAG GCTCGCTACC CTGCCGATGA GTGGAATATC
TATGCCGCAC AAGCCTCTGA CGGTGATAAC TGGGCCGATG ACTCACCCAC CTGTCGACAA
TTATTGGAAC AAAAAATCCT GCCGCTAGTA CGCTATTTTA GCTATATCGA AATCACCAAT
CGTGCGCACC AAACCCTGTG GCGCGAATAC GAATCCCTAC AACAACACTA CGACAACATA
GCGGTGCAAC ATATTCGTCA AGCCGAAGAT ATCTACCCTG TATTTAGAGA ATTATTTAAA
AAACAGGCGG TTTAA
 
Protein sequence
MRMANFIDRR LNAKGKSTVN RQRFINRYKQ QIKKAVSDAV TRRSVTDVDK GEKISIPTRD 
ISEPMFHQGK GGVRDRVHPG NDQFTRGDKI DRPQGGAGGG AGKGDASDSG EGNDDFVFEI
SKDEYLELLF EDLELPNLQK NRLNKLVEYQ IYRAGFTNDG VPANINIVRS LRSSLARRIA
MSASKKKLLK ELEQELAELE NIPGTKAELI LDLKAQIEAL KQKIAKVPFI DTFDLRFNNF
ARREVPSSQA VMFCLMDVSG SMDQATKDMA KRFYILLYLF LTRTYKNLEV VHIRHHTQAK
EVDEHEFFYS QETGGTIVSS ALKLMHEIQQ ARYPADEWNI YAAQASDGDN WADDSPTCRQ
LLEQKILPLV RYFSYIEITN RAHQTLWREY ESLQQHYDNI AVQHIRQAED IYPVFRELFK
KQAV