| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1634 |
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| Symbol | nhaB |
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| ID | 4476598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1922960 |
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| End bp | 1924561 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639726217 |
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| Product | sodium/proton antiporter |
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| Protein accession | YP_869273 |
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| Protein GI | 117920081 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3067] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00774] Na+/H+ antiporter NhaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000708329 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.136826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATGA CAATGAGTCA GGCGTTTATT GGGAACTTCT TAGGGAATTC TCCTAAGTGG
TACAAGATCG CAATACTGTC GTTTTTAATA ATCAATCCAA TACTCTTTTT CTATGTCAGC
CCCTTTGTGG CTGGTTGGGT ATTAGTACTT GAGTTTATTT TTACCTTGGC AATGGCGCTA
AAATGCTACC CATTACAACC CGGTGGTCTA TTAGCGATTG AAGCTGTCGC CATCGGCATG
ACCTCAGCAA GCCAAGTGCT GCACGAAATT GAAGCGAACC TTGAAGTGCT ATTACTGCTG
GTATTTATGG TGGCCGGCAT TTACTTCATG AAGCAGCTAC TGCTGTTTGT GTTCACTAAG
ATGATCACTA AAGTACGTTC GAAAATCTTA GTGTCTTTGT TGTTCTGTCT AGCTTCCGCC
TTCTTATCCG CCTTCTTAGA TGCGTTAACT GTTATCGCCG TGATTATCAC CGTGGCGGTT
GGTTTTTACT CCATCTATCA CAAAGTCGCC TCAGGTAAAG ATTTCTCGGC CGATCATGAC
CATACCTCCG AAGGCAAAAA TGACGATGGT GAAAATCAGC TCAACGAAGA CGAGCTGGAA
TCCTTCCGTG GTTTCCTACG TAACCTGTTA ATGCACGCCG GTGTCGGTAC TGCATTGGGT
GGCGTGTGTA CTATGGTGGG TGAACCGCAA AACTTAATTA TTGCAGCTCA AGCAAACTGG
CAATTTGGCG AATTTGCGAT CCGTATGTCA CCTGTGACAG TGCCTGTATT GTTCGCAGGT
ATCCTCACCT GCTTTATCGT CGAGAAATTC CGTTGGTTTG GTTATGGTGC CCAGCTTCCG
GATGCGGTGC ATAAAATCCT ATGTGATTAC GCCGCCTATG AAGACGCACG TCGTACCAAC
AAAGACAAGA TGAAGCTGGT TATCCAAGCC TTTGTGGGTG TGTGGTTGAT TGCGGGTCTC
GCGCTGCACT TAGCGTCTGT GGGCTTGATT GGTCTGTCTG TGATCATCTT AACCACGGCC
TTTAACGGTA TTACCGATGA GCATGCGCTA GGTAAAGCCT TCGAAGAAGC CCTGCCCTTT
ACGGCCTTGT TAGCGGTGTT CTTTGCGGTT GTTGCCGTAA TCATCGACCA ACAACTGTTT
GGCCCTGTCA TCCAATGGGC ACTAAACCAT GAAGGTAATA CCCAATTAGT GATCTTCTAT
ATCGCTAACG GTTTACTCTC TATGGTCAGT GATAACGTGT TTGTGGGCAC GGTTTACATT
AACGAGGTCA AAGCCGCCCT GATTAACGGT CAAATCACCC GGGATCAATT CGACCTGTTA
GCAGTTGCGA TTAACACTGG TACTAACTTG CCTTCGGTGG CAACACCAAA CGGTCAAGCC
GCATTCCTGT TCTTATTGAC CTCGGCTCTT GCACCGCTGA TCCGTTTATC CTACGGCAGA
ATGGTTTGGA TGGCATTGCC CTACACTATC GTGCTATCGA TTGTGGGCGT GATGGCTATT
CAATCGGGCT TCTTAGAGCA GATGACCCAG TACTTCTATG ACTCCCATGC AATATTGCAC
CACAGTGTTA AAGAAGCGTT AGCGCCTGCT GCAGCTCACT AA
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| Protein sequence | MPMTMSQAFI GNFLGNSPKW YKIAILSFLI INPILFFYVS PFVAGWVLVL EFIFTLAMAL
KCYPLQPGGL LAIEAVAIGM TSASQVLHEI EANLEVLLLL VFMVAGIYFM KQLLLFVFTK
MITKVRSKIL VSLLFCLASA FLSAFLDALT VIAVIITVAV GFYSIYHKVA SGKDFSADHD
HTSEGKNDDG ENQLNEDELE SFRGFLRNLL MHAGVGTALG GVCTMVGEPQ NLIIAAQANW
QFGEFAIRMS PVTVPVLFAG ILTCFIVEKF RWFGYGAQLP DAVHKILCDY AAYEDARRTN
KDKMKLVIQA FVGVWLIAGL ALHLASVGLI GLSVIILTTA FNGITDEHAL GKAFEEALPF
TALLAVFFAV VAVIIDQQLF GPVIQWALNH EGNTQLVIFY IANGLLSMVS DNVFVGTVYI
NEVKAALING QITRDQFDLL AVAINTGTNL PSVATPNGQA AFLFLLTSAL APLIRLSYGR
MVWMALPYTI VLSIVGVMAI QSGFLEQMTQ YFYDSHAILH HSVKEALAPA AAH
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