Gene Shewana3_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1601 
SymbolrlmL 
ID4476559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1878599 
End bp1880740 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content49% 
IMG OID639726179 
Product23S rRNA m(2)G2445 methyltransferase 
Protein accessionYP_869241 
Protein GI117920049 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0419159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.867514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAATT TTTTTGCTGC CGCCCCTAAG GGCTTTGAAT ATAGCTTAGC CCAAGAACTG 
ACAGAATTTG GTGCGACTGA GATTAAAGAG AGTGTTGCCG GTGTCTATTT TACCGCGCCG
CTTGCCTTAG CCTACCGTAT TACCCTGTGG ACGCGTTTGG CCAGCCGTAT CGTGCTGGTG
ATCTATAAGG GCCCCTGTGA GTCGGCGGAG CAATTATATA ACGCAGCTTA TTGTATTGAT
TGGTCAGCTC ATTTCTCCAA TCGCAACACC TTTAGTATCG ATTTTCACGG CACTGGCGGC
TTTATCAACA ACACCCAGTT TGGTGCGTTA AAGATTAAAG ATGCGATTGT TGACCGTTTC
CGTGATGACG GTGATGCCCG TCCAAACGTC GCCCGTATCG ATGCCGACAT TAAAATCGAC
GCCCATTTCC GTAATGGGGT GATTACCATT GCGATGAACT TCTCGGGACC TTCTTTGCAT
CAACGCGGTT ATCGCTCTAC GACCGGTGAA GCACCGTTAA AAGAAAACCT CGCCGCCAAC
ATGCTAGTGC GCAGTGGCTG GAAAGCCGCG CCAACGACCT TACTCGATCC TTTCTGCGGC
AGTGGTACTG TACTGATTGA GGCCGCATTA ATGGCTGCCG ATATTGCTCC AGGGTTGCAG
CGCAGCCGTT TTGGTTTTGA GCATTGGCGC CGCCATGATA AAGCGACATG GCATGAGATT
TTAGAAGAGG CCAAGGCGCG CGCATCCTTA GGTGTAAAGC GTTGTGACGT GAAGTTCTAC
GGCTCGGATA TCGATTCGCG CTTAGTGGCC CTAGCAAAAC GCAATGCGCA AAACGCCGGT
GTATTTGAGC TGATTGACTT TAAAGTCGCT AATGCGCTCA ATGTCGAGCC GCCCGCCGCC
GAAGGTTACC TGATTACTAA CCCTCCCTAC GGTGAGCGTT TAGGCAGTGT TTCTGAGCTA
TTGCAGCTGT ATTACCAATT AGGCGACAAG TTTAAAAAGG AGTTTGGCGG CTGGAAAGTG
GCTATGCTCT GTAGCGATAT TGAGCTGATT TCGGCGCTGA AACTCAAAGC CGATAAACAG
ATGAAGATGT TTAATGGTGC GCTGGAGTGT GCCTTTAACC TGTATACCTT GCACGCGCAA
AGCACTCGCC GAGATACGCC AGTATTGCCG GAAGGAGTAG ACATTGCCGA TATCGCGCCA
GCATTTGCTA ACCGTATTAA GAAAAACGCC AAGCAATTAG AAAAGTGGGC GAAAAAAGAA
GGTATCGATA GCTACCGTTT ATATGATGCC GACATTCCCG AATATAACGT GGCGGTCGAC
CGCTACTTAG ATCATATCGT GGTGCAGGAA TATATGGCGC CGGCCAGCAT TCCTGAGGCC
GTGACAAAAC GTCGTTTAAG CGATGTGCTC TTGGCGCTGC CTGCTGCGAT TGGTGTCGAT
CCGCACAAGA TCACTATGAA GACCCGTGAG CGTCAAAAGG GCACCAATCA ATATCAAAAG
CTCGATGAGC GTAAGCTTGA GCTTATCACC ACCGAATATG GCGCTAAGTT TAAGCTGAAC
CTGACAGGCT ATTTGGATAC TGGCTTGTTC CTCGATCACA GATTAACCCG CCGTTTAGTG
GGACAAAAAT CGAAAGGTCG CCGGGTATTG AACCTGTTCT CCTACACAGG TTCTGCCTCT
GTGCATGCCG CATTAGGCGG TGCTAAGTCG GTCACGACGG TTGATATGTC CAACACTTAT
CTTGCGTGGG CAAAGGAAAA CTTTGCGTTA AACGATCTCA GTGGCAAGCA GTATGAGTTT
GTGCAGGCCG ATTGTTTGCA ATGGATCCGC GATAGTGCGC ACGATAAATC CGCGCAATAC
GATTTGATTT TTATCGATCC GCCGACCTTC TCTAACTCTA AGCGGATGGA AGATTCCTTC
GATGTACAGC GTGACCATGT GAATTTACTA GGCATGCTTA TCAAGCTGTT AAGTCCAAAT
GGGGAGATAG TGTTCTCCAA CAACAAACGC AAGTTTAAGA TGGACACCGA CACCTTGGTC
AAGATGAAAA TCAAGGTGGA AAACATCGAT GATCTGACCT TGCCTATGGA TTACAAGCGC
AATCCCCATA TCCATAATAC TTGGTTAATC ACCCATGCAT AA
 
Protein sequence
MLNFFAAAPK GFEYSLAQEL TEFGATEIKE SVAGVYFTAP LALAYRITLW TRLASRIVLV 
IYKGPCESAE QLYNAAYCID WSAHFSNRNT FSIDFHGTGG FINNTQFGAL KIKDAIVDRF
RDDGDARPNV ARIDADIKID AHFRNGVITI AMNFSGPSLH QRGYRSTTGE APLKENLAAN
MLVRSGWKAA PTTLLDPFCG SGTVLIEAAL MAADIAPGLQ RSRFGFEHWR RHDKATWHEI
LEEAKARASL GVKRCDVKFY GSDIDSRLVA LAKRNAQNAG VFELIDFKVA NALNVEPPAA
EGYLITNPPY GERLGSVSEL LQLYYQLGDK FKKEFGGWKV AMLCSDIELI SALKLKADKQ
MKMFNGALEC AFNLYTLHAQ STRRDTPVLP EGVDIADIAP AFANRIKKNA KQLEKWAKKE
GIDSYRLYDA DIPEYNVAVD RYLDHIVVQE YMAPASIPEA VTKRRLSDVL LALPAAIGVD
PHKITMKTRE RQKGTNQYQK LDERKLELIT TEYGAKFKLN LTGYLDTGLF LDHRLTRRLV
GQKSKGRRVL NLFSYTGSAS VHAALGGAKS VTTVDMSNTY LAWAKENFAL NDLSGKQYEF
VQADCLQWIR DSAHDKSAQY DLIFIDPPTF SNSKRMEDSF DVQRDHVNLL GMLIKLLSPN
GEIVFSNNKR KFKMDTDTLV KMKIKVENID DLTLPMDYKR NPHIHNTWLI THA