| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1600 |
|---|
| Symbol | |
|---|
| ID | 4476555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 1877302 |
|---|
| End bp | 1877586 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639726175 |
|---|
| Product | heat shock protein DnaJ domain-containing protein |
|---|
| Protein accession | YP_869240 |
|---|
| Protein GI | 117920048 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.537341 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAACC ACTTTAGTGT GCTCGGTATC AAACCTAGCG CCAAAGAAGA CGACATTAAA
AAAGCCTATC GCCGGCTCTC AAATAAATAC CATCCCGATA AGTTGTTAGG TGCCTCTGAT
GAAGAAAAAG AGCAAGCATC ACAACAACTT GAGCGCGTTA AAAAAGCTTA TGAAGTGCTC
TCAGATCCCA AGCTTAGAAA TGCGTTTATC CGAGACTTCA ACAATGTGAT CGTGACCGAT
CCCAATGGCG CGATGCGCGA ATTGTGGGAT CAATTTTACC CTTAA
|
|---|
| Protein sequence | MINHFSVLGI KPSAKEDDIK KAYRRLSNKY HPDKLLGASD EEKEQASQQL ERVKKAYEVL
SDPKLRNAFI RDFNNVIVTD PNGAMRELWD QFYP
|
|---|
| |