Gene Shewana3_1598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1598 
Symbol 
ID4476553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1875869 
End bp1876627 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content43% 
IMG OID639726173 
Producthypothetical protein 
Protein accessionYP_869238 
Protein GI117920046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.547596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTA GTCTCATTGA AATAACCGTT GCCGAGATTA AAGAACTCGC CGATGTCGAG 
CCAAAACAGG CCAGTAAACG TTTCGAACTC ATCGCCACCA CAATGAACGA TGAGCAATTA
GTCGAAGTCA TTGAAAAAAT GGATATTGTG ACCCTGACGC AAATCAACAG TCACCACGAT
ATCTCCTGCC CGTCAATTAT GTCGGAGCTG ATGACCCCTG AACAAATTCG CGACATCGTC
TGTCAGCAAC CTTTGTATTG GGAAGAAAAA ATCAAGAATA ATGCCGAAGA ACTCATTCAG
CATACCTTTG ATTTTTTAAC TTATTTAATT CGCATCCAAG ACAGCGAAGA AAAACAAACC
GCTATTTTAG AGTGCATTGC CGAAGATCCC GCAGGCCTCT TCTATCTGTC TATACCCTTT
ATCGAGATGA TGTTGGGTGA GCGCCACGAC GATGAAGACC ACTTCAACGA TTATTACGAC
GACGAGGAAG ATACCGACAC CGTCGGCTAT GACAGTCGTG TCGACAGTGA AGAAGCCCAT
AGTTTAAGCC TAGATGACCC ACGTAGTCTG ATGGCGTTAA TCCATGAGCT GGCACCCGAT
GTAGAAAAAG CCATTAAAAA CCTGCTGCAT AACGAAAGCT CTGGTTGGGA GATAATCATT
AACAAGTTCG TCAATGAACT GGTTATCCAA GCGAAAGAGA AAAACCAAGT CACGGACGAA
TACGCAGAAG TGGATGATAT GTTTAGCTTT TTAGATTAA
 
Protein sequence
MNTSLIEITV AEIKELADVE PKQASKRFEL IATTMNDEQL VEVIEKMDIV TLTQINSHHD 
ISCPSIMSEL MTPEQIRDIV CQQPLYWEEK IKNNAEELIQ HTFDFLTYLI RIQDSEEKQT
AILECIAEDP AGLFYLSIPF IEMMLGERHD DEDHFNDYYD DEEDTDTVGY DSRVDSEEAH
SLSLDDPRSL MALIHELAPD VEKAIKNLLH NESSGWEIII NKFVNELVIQ AKEKNQVTDE
YAEVDDMFSF LD