Gene Shewana3_1579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1579 
Symbol 
ID4478803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1847909 
End bp1848904 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content47% 
IMG OID639726149 
Productalcohol dehydrogenase 
Protein accessionYP_869219 
Protein GI117920027 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0936386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAGCA GTCAAATTCA TTTAGCATCA CGCCCTGTTG GTATGCCGAC GCTGGCAAAC 
TTTAAACAGG TCGAGGTGAC GTTGCCCGCA TTAAAAGCCG GTGAAGTGTT GGTTAAAAAC
ACCTGGATGT CGGTCGATCC CTATATGCGT GGTCGTATGA TGGATAGGGA TTCCTACATT
CCACCCTTCC AGATTGATGC GGTTATGGAC GGCGGGGCAA TAGGCGAAGT GATTGAGTCA
CTCAATCCAC AATTCCCAGT AGGTTCAAAA GTGAGCCATA TCAGCGGTTG GCGCAGCGCC
TTTATTAGTG ATGGGCAGGA TCTCACCTTA TTGCCTGCGG TGAATATTCC TGAGCAATAC
TTTTTAGGTG TTATCGGCAT GCCCGGATTA ACTGCTTGGG TGGGGCTGAT GCAAATCGCT
AAGTTAAAAC CAACGGATAC TGTATTTGTT TCAGCCGCAT CGGGTGCTGT CGGTATGGTT
GTCTGTCAAA TCGCTAAGCT TAATGGCTGT AAAGTGATTG CTTCGGTTGG CTCGGATGAG
AAGGCCGAAT TGGTTCAAAG TTTGGGCGTG GATGCCGTGA TTAACTATAA AAAAGTCACT
GATTTAACTC AGGCTTTGCG CGACGCGGCG CCTAATGGCA TTGATGTGTA TTTTGAGAAT
GTCGGCGGCG CTCATCTTGA AGCCGCGTTG AATGTGTTAA ACGAATATGG CCGCATTCCT
GTATGTGGGA TGATTGCCGA TTACAATGCG CAGGCACCAG TCTCGGGGCC AAGTAATCTG
TTAGCCATCA ACACTAAAAA GTTAACCATG CAGGGCTTTA TTGTGATGGA CTACTTCGAT
CAGTTTGAAG AATTCATCGC TCAAATGGCG CAGTGGCTGC AAGCGGGTAA AGTGAAATCG
CAAGAAACCG TTTATCATGG TTTAGACCAA GCTGCTGAGG CGTTTATCGG CCTGTTTGAA
GGCAAAAACA AAGGCAAAAT GCTCGTTAAA CTCTAA
 
Protein sequence
MISSQIHLAS RPVGMPTLAN FKQVEVTLPA LKAGEVLVKN TWMSVDPYMR GRMMDRDSYI 
PPFQIDAVMD GGAIGEVIES LNPQFPVGSK VSHISGWRSA FISDGQDLTL LPAVNIPEQY
FLGVIGMPGL TAWVGLMQIA KLKPTDTVFV SAASGAVGMV VCQIAKLNGC KVIASVGSDE
KAELVQSLGV DAVINYKKVT DLTQALRDAA PNGIDVYFEN VGGAHLEAAL NVLNEYGRIP
VCGMIADYNA QAPVSGPSNL LAINTKKLTM QGFIVMDYFD QFEEFIAQMA QWLQAGKVKS
QETVYHGLDQ AAEAFIGLFE GKNKGKMLVK L