Gene Shewana3_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1578 
Symbol 
ID4478802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1847247 
End bp1847672 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content45% 
IMG OID639726148 
ProductMarR family transcriptional regulator 
Protein accessionYP_869218 
Protein GI117920026 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0267314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAAA AATTATCAGA CAACGTATGC TTTGCACTGT ATTCGGCGAC CAACTCATTA 
GTGCGAGCCT TTCGTCCCAT CCTTGACGAG TATGATCTCA CCTACCCCCA GTACATAGTG
ATGCACTCAC TTTGGTACGT GAACGACGTC AGCCTCAAAG AATTGTCTAA CGACACGCGT
TTAGATCCCA GCACCTTAAC GCCAATCGTT AAACGCTTGG AGTCAAAAGG ATTACTCACC
CGTAATTTAT CCGAGTTGGA TGAACGTAAA AAGGTCATTT CCCTCACCGA TAAGGGCCGA
CAATTACAGG AAGAAGCGAC TCAACTTACG GAGAAATTGG TGGCTCGCTC CAATATGAAT
GCTGAGCGTA TCGAGGAATT ACGTCGCTTA TGTCTTGAAT TAGAAGCAGA TTTATCGAAA
GACTAG
 
Protein sequence
MAQKLSDNVC FALYSATNSL VRAFRPILDE YDLTYPQYIV MHSLWYVNDV SLKELSNDTR 
LDPSTLTPIV KRLESKGLLT RNLSELDERK KVISLTDKGR QLQEEATQLT EKLVARSNMN
AERIEELRRL CLELEADLSK D