| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1575 |
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| Symbol | |
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| ID | 4478799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1842657 |
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| End bp | 1844393 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726145 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_869215 |
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| Protein GI | 117920023 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000206657 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGTGTAC AAGGATTAAC TTATCTGATT GTGGGGCTGT CGTTCGCGCT CTACATTGGG
ATCGCGATTT GGTCCCGTGC GGGTTCGACT AAAGAGTTTT ATGTTGCGGG TGGCGGTGTT
CACCCTGTAG TGAACGGTAT GGCGACTGCA GCCGACTGGA TGTCAGCAGC ATCCTTTATT
TCGTTAGCGG GTATTGTCTC TTTCGTCGGT TACGACGGCA GTGTGTACCT GATGGGCTGG
ACGGGCGGTT ACGTATTATT AGCCCTGTGT ATGGCGCCGT ACTTACGTAA ATTTGGTAAG
TTCACTGTGC CTGATTTCGT GGGTGAGCGT TACTACTCGC AAGCGGCGCG TACGGTCGCG
GTTATTTGCG CTATCTTCAT CTGCTTTACT TACATCGCGG GCCAAATGCG CGGTGTGGGC
GTGGTTTTCT CGCGCTTCCT CGAAGTGGAT GTGGACACTG GCGTGTATAT CGGTATGGCT
GTGGTGTTCT TCTACGCGGT GCTCGGCGGT ATGAAGGGTA TTACCTATAC TCAGGTTGCC
CAATACTGCG TACTGATTTT CGCCTTTATG GTGCCAGCAA TCTTCTTATC TGTGATGATG
ACGGGTCATA TCATTCCTCA AATTGGTTTC GGTGCTCAGT TACTTGATGC TGCGGGGAAT
AACTCTGGCG TTTATCTGTT AGAGAAACTG AACAATCTGT CTGTGGATTT AGGCTTTGCT
CCTTATACCG ATGGCTCTAA GAGCATGATC GACGTGTTCT GTATTACTGG CGCTTTGATG
GTGGGTACTG CGGGCTTACC CCACGTTATC GTGCGTTTCT TTACTGTTCC TAAAGTGAAA
GATGCGCGTG TATCAGCCGG TTGGGCGCTG GTGTTTATCG CCATCATGTA CACCACAGTT
CCTGCATTGG CGGCATTCTC TCGCGTCAAT ATGATCGAAA CCATTAACGG TCCAGATCAA
AAGGGTGTTG CCTATGAAAC TGCGCCAGAT TGGATCAAAA ACTGGGAAAA AACCGGTCTG
ATCAAATGGG ATGACAAAAA CGGCGACGGC AAAATCTACT ATGCCAAAGG CAAAATGGAA
GATGCTGCTA GCCCTAACGA AATGAAGATC GACAACGACA TCATCGTATT AGCAACGCCA
GAAATCGCGA ATCTGCCAGC TTGGGTTATC GCACTGGTAG CTGCGGGTGG TTTAGCAGCG
GCGTTATCTA CCTCTGCGGG TCTGTTACTG GTTATCTCGA CTTCAGTATC ACACGACTTA
CTGAAGAAGA ACCTGATGCC AAATATCTCT GACAAGAAAG AGCTGATGTA CGCTCGACTG
GCAGCCGGTA TCGGCATCGT GATTGCGGGT TACTTCGGGG TTAACCCACC AGGATTCGTG
GCAGCGGTAG TGGCGTTCGC CTTTGGTCTG GCGGCATCCT CTCTGTTCCC AGCCATCATC
ATGGGTATCT TCTCTAAGAC GATGAACAAA GAAGGTGCAA TCGCAGGTAT GGTTATCGGT
CTACTGTTCA CTGCGGGTTA CATCATCTAC TTCAAGTTTG TGGACCCAAC AGCTAACGTG
GCGGCTAACT GGTTCCTCGG TATTTCGCCA GAAGGTATCG GTATGGTCGG TATGGTGGTG
AACTTTGCGG TGGCGGCTAT CGTCTGTAAG GTGACCGCAG CGGCACCTGC CCATGTACAA
GATATGGTTG AATCTATCCG TTTCCCTAAA GGGGCGGGAG AAGCGAGCAG CCATTAA
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| Protein sequence | MGVQGLTYLI VGLSFALYIG IAIWSRAGST KEFYVAGGGV HPVVNGMATA ADWMSAASFI
SLAGIVSFVG YDGSVYLMGW TGGYVLLALC MAPYLRKFGK FTVPDFVGER YYSQAARTVA
VICAIFICFT YIAGQMRGVG VVFSRFLEVD VDTGVYIGMA VVFFYAVLGG MKGITYTQVA
QYCVLIFAFM VPAIFLSVMM TGHIIPQIGF GAQLLDAAGN NSGVYLLEKL NNLSVDLGFA
PYTDGSKSMI DVFCITGALM VGTAGLPHVI VRFFTVPKVK DARVSAGWAL VFIAIMYTTV
PALAAFSRVN MIETINGPDQ KGVAYETAPD WIKNWEKTGL IKWDDKNGDG KIYYAKGKME
DAASPNEMKI DNDIIVLATP EIANLPAWVI ALVAAGGLAA ALSTSAGLLL VISTSVSHDL
LKKNLMPNIS DKKELMYARL AAGIGIVIAG YFGVNPPGFV AAVVAFAFGL AASSLFPAII
MGIFSKTMNK EGAIAGMVIG LLFTAGYIIY FKFVDPTANV AANWFLGISP EGIGMVGMVV
NFAVAAIVCK VTAAAPAHVQ DMVESIRFPK GAGEASSH
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