Gene Shewana3_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1566 
Symbol 
ID4478790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1830178 
End bp1830957 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content48% 
IMG OID639726136 
Productputative sulfate transport protein CysZ 
Protein accessionYP_869206 
Protein GI117920014 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2981] Uncharacterized protein involved in cysteine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000261033 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000695889 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACACAGA AATCCTCCTC CCCTTCACAG GGTAAAAGTG GTGTGAATTA TTTTCTCGAT 
GGCTTTGGTT TAATCAAACG TAAAGGCCTG CGCACCTTTG TATTTATTCC CTTAATGATC
AACTTAGTGC TGTTTGCGGC GGTTATCTAT GTGGCGATTG GGCAGCTCGA TGTGCTCTTC
ACTTGGATGA ATGCCCAGCT TCCCGAATAC TTAAGTTGGC TTAACTTTTT GCTCTGGCCG
TTAGCGGTGA CCACTATGTT GGTGATGCTG GCGTTTGTCT TTAGTTCGGT AATGAACTGG
CTGGCCGCGC CCTTTAATGG TTTGCTGGCC GAAAAGGTCG AGCAGTTATT GACCGGCAAG
CCGATGAATA CGGGCTCGGG CATGGACGTC GTCAAAGACT TACCACGCAT TCTTGGCCGT
GAATGGATCA AACTCAAATA CTATTTGCCC CGGGCGCTAG TATTTTTGCT GCTGTTTTTA
GTGCCCATGG TGGGGCAAAC CTTAGCGCCA ATTTTGTGGT TTTTATTCAG CGCTTGGATG
ATGGCGATTC AATACTGCGA CTATCCCTTC GATAACCACA AGGTGAGCTT CAAAGATATG
CGCTTTGCCC TTAATCAAAC CCGTGGCACC AGCTTTACCT TTGGTGCGAC TGTGACCCTG
TTTTCGATGA TCCCTGTGGT GAACTTTATC GTGATGCCAG TGGCGATTTG TGGTGCCACC
GCCATGTGGG TCGATAAATA CCGCGAAGCT TACCGTAATC CTGTGGTTTC TCCCGAATAA
 
Protein sequence
MTQKSSSPSQ GKSGVNYFLD GFGLIKRKGL RTFVFIPLMI NLVLFAAVIY VAIGQLDVLF 
TWMNAQLPEY LSWLNFLLWP LAVTTMLVML AFVFSSVMNW LAAPFNGLLA EKVEQLLTGK
PMNTGSGMDV VKDLPRILGR EWIKLKYYLP RALVFLLLFL VPMVGQTLAP ILWFLFSAWM
MAIQYCDYPF DNHKVSFKDM RFALNQTRGT SFTFGATVTL FSMIPVVNFI VMPVAICGAT
AMWVDKYREA YRNPVVSPE