Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1566 |
Symbol | |
ID | 4478790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1830178 |
End bp | 1830957 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639726136 |
Product | putative sulfate transport protein CysZ |
Protein accession | YP_869206 |
Protein GI | 117920014 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2981] Uncharacterized protein involved in cysteine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000261033 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000695889 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACACAGA AATCCTCCTC CCCTTCACAG GGTAAAAGTG GTGTGAATTA TTTTCTCGAT GGCTTTGGTT TAATCAAACG TAAAGGCCTG CGCACCTTTG TATTTATTCC CTTAATGATC AACTTAGTGC TGTTTGCGGC GGTTATCTAT GTGGCGATTG GGCAGCTCGA TGTGCTCTTC ACTTGGATGA ATGCCCAGCT TCCCGAATAC TTAAGTTGGC TTAACTTTTT GCTCTGGCCG TTAGCGGTGA CCACTATGTT GGTGATGCTG GCGTTTGTCT TTAGTTCGGT AATGAACTGG CTGGCCGCGC CCTTTAATGG TTTGCTGGCC GAAAAGGTCG AGCAGTTATT GACCGGCAAG CCGATGAATA CGGGCTCGGG CATGGACGTC GTCAAAGACT TACCACGCAT TCTTGGCCGT GAATGGATCA AACTCAAATA CTATTTGCCC CGGGCGCTAG TATTTTTGCT GCTGTTTTTA GTGCCCATGG TGGGGCAAAC CTTAGCGCCA ATTTTGTGGT TTTTATTCAG CGCTTGGATG ATGGCGATTC AATACTGCGA CTATCCCTTC GATAACCACA AGGTGAGCTT CAAAGATATG CGCTTTGCCC TTAATCAAAC CCGTGGCACC AGCTTTACCT TTGGTGCGAC TGTGACCCTG TTTTCGATGA TCCCTGTGGT GAACTTTATC GTGATGCCAG TGGCGATTTG TGGTGCCACC GCCATGTGGG TCGATAAATA CCGCGAAGCT TACCGTAATC CTGTGGTTTC TCCCGAATAA
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Protein sequence | MTQKSSSPSQ GKSGVNYFLD GFGLIKRKGL RTFVFIPLMI NLVLFAAVIY VAIGQLDVLF TWMNAQLPEY LSWLNFLLWP LAVTTMLVML AFVFSSVMNW LAAPFNGLLA EKVEQLLTGK PMNTGSGMDV VKDLPRILGR EWIKLKYYLP RALVFLLLFL VPMVGQTLAP ILWFLFSAWM MAIQYCDYPF DNHKVSFKDM RFALNQTRGT SFTFGATVTL FSMIPVVNFI VMPVAICGAT AMWVDKYREA YRNPVVSPE
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