| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1562 |
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| Symbol | |
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| ID | 4478786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1824497 |
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| End bp | 1825846 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639726132 |
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| Product | RDD domain-containing protein |
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| Protein accession | YP_869202 |
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| Protein GI | 117920010 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1714] Predicted membrane protein/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0211691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAC AACAAACGGA CTTGGGCAAA GATCCAAGAA CTATGGTCAC CCCTAAGGCA
TTCACTATTG CCGAATCGGT ACTTTATACC CCGTTAGCTA CGCCATTTAA GCGGGCATTG
GCGATGTTAA TCGACGGTTT ATTTATCACT ATTTTAGCCG AACAAATGGA TTGGCTGTTT
GTTCTGCTGG TGGTGGGGAT TATTTATATC GAGAAACGCA GTCGTCAGTT TGGCCGCTTA
CTCAAATGGG GCCTGTATGC GGCCATGCTG GGGTTAATGC TCTTTAGCTC GGCGGGGAAT
TTGTGGAATT TCCATCAATC GAGTAAAACT TCCCGCGAAA AGGTCTCTGC CCCTCAAGAT
ATCAATGCTG TTGTTAAGGC GATTCCAGGT CTTGTCTCCC TCGGACTCTG TGAAAATACC
GATTGTGCCC GTGAACAGAT CCATTCTTTG CAACAGACGC TCGACACTCA GACGCTCGAG
AATGTGCCTA TGGAGGGAAT GTCGGCAGTT GAGCGCCGCG ATATGGTATT AGAGACTTTA
GCAAGCACGG ATTTATCCGA TGCAGATAAA GCACAGTTAC GTGATGAAAT TATGGCGGGC
AGCCTCTGGC CCGAGGTGAA AGGGCTTGAA GTCACCCTAG ACTCCACCAA GGGCTTAGCT
AAAAATTCAA CCAAGGATTC AAGCACATTA TCACAGCCGC CACAGCCAAA TCAGTCGCTC
GTAAATCAAT CGACCGATGG CAAGCTTGAC GCAGTTCCCG TATCTGAACC GCAAACCGAT
GGATTAGCTA ACGTTCAAAC CGATATTCGA GGGGCCATGG AAAACGCTCC CTCAGCTCCA
GACGCCAATC TGATTCCTGC GCATAAAACC GAAGGCCGCA ACAGTGACAT CGCCGACGAG
GAAGAGAGTG ACACCCGCAG TGTGCTGGCG TGGATCAAAG GCTTTATGAG CGATATGGGC
TTAGGCTTTG GCTGGGCTGC ATTTTACTTC ACCGTGTTTA CTGCCAAATT TGATGGTCAG
ACCTTAGGGA AGAAACTCTT AGGCATCCGC GTTATCCAAC TCGATGGCGC TAAAATCAGC
CTTTGGGGGG CATTTGGCCG TTATGGTGGT TATGCGGCGG GCTTCACGAC GGGTTTACTG
GGCTTTATGC AGATATTTTG GGATGCCAAT CGGCAGGGGA TCCAAGATAA AATATCTTCC
ACAGTCGTGA TAGACTTAGC GCAAATGCAT AAAAAGCAAC AAATAGAGCA GCAACAGGCG
CAGGCTGAAC ACGCATTGGC CGCCGTGCCA ACACAGAATA ATGCGACGTC TGCTCACCTT
ACAACAAGCA CCCGTTCGGA GCACCTATGA
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| Protein sequence | MKQQQTDLGK DPRTMVTPKA FTIAESVLYT PLATPFKRAL AMLIDGLFIT ILAEQMDWLF
VLLVVGIIYI EKRSRQFGRL LKWGLYAAML GLMLFSSAGN LWNFHQSSKT SREKVSAPQD
INAVVKAIPG LVSLGLCENT DCAREQIHSL QQTLDTQTLE NVPMEGMSAV ERRDMVLETL
ASTDLSDADK AQLRDEIMAG SLWPEVKGLE VTLDSTKGLA KNSTKDSSTL SQPPQPNQSL
VNQSTDGKLD AVPVSEPQTD GLANVQTDIR GAMENAPSAP DANLIPAHKT EGRNSDIADE
EESDTRSVLA WIKGFMSDMG LGFGWAAFYF TVFTAKFDGQ TLGKKLLGIR VIQLDGAKIS
LWGAFGRYGG YAAGFTTGLL GFMQIFWDAN RQGIQDKISS TVVIDLAQMH KKQQIEQQQA
QAEHALAAVP TQNNATSAHL TTSTRSEHL
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