Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1557 |
Symbol | |
ID | 4478781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1815829 |
End bp | 1817397 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639726127 |
Product | hypothetical protein |
Protein accession | YP_869197 |
Protein GI | 117920005 |
COG category | [S] Function unknown |
COG ID | [COG1288] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.750418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.28282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACTC CACCCTCGAC GACTCAGCCA ACAGAAGCAG CTCAGACTGC TATGGCACCA TCCGCTTCAC ACGCTCCCTC ATCCTTTCAA ATGCCCGATA CCTTAGTGAT CATCTTTTTT GTGGCATTAC TTGCGGGATT AATGACTTAC TTTATTCCGA TTGGGTCGTT TCAAACCCAA GAGGTGCATT ATCTGGCCGA AGGTGTCGAT AAAGCGAGGA CAGTAGTCGA CCCTAATTCA TTTGCCTATC AATTGGATGA TGCGGGCGAG CCTAAGCTGC AACCAGTGGC ACTGTTTAAA GGCGAGGGCG GGGTTGGCTT TTTTAACTTC GCCTTTGAGG GCTTAACCTC GGGTTCTAAA TGGGGCAGCG CGATTGGCGT GATCATGTTT ATGCTAGTGA TTGGTGGCTC CTTCGGGGTG GTGATGGCCA CAGGCACCAT AGATAACGGC ATCTTAAAGT TAATCGATAA AACCCGTGGC AATGAAAAGT TATTCATTCC GGTGATATTT ACGCTGTTTT CCCTCGGCGG CGCCGTGTTT GGCATGGGAG AAGAGGCCAT TGCCTTCGCG ATTATCATCT GCCCACTCAT GATCCGTTTA GGGTACGACG GCATCACCAC TGTGATGGTG ACCTATGTGG CGACCCAAAT TGGTTTCGCT AGTTCTTGGA TGAATCCTTT CAGTGTGGCA ATTGCGCAGG GCATTGCGGG GATCCCGGTT CTTTCAGGCA GTGAGTTTCG CTTCCCTATG TGGCTCGGAT TCACATTGCT TGGCATCGTT TTTACCATGC GTTACGCCCA TCGCATTCAA CAGCAACCAA GTATTTCCCA TAGCTATCAG TCCGATGCTT ATTTCCGTGA GCACCATGCT AATACGAAGC TCGAGAGCCG CTTTAATCTT GGGGATGTGT TGGTGCTGTT GTTGTTAGTG TTAACTATGG TGTGGGTGAT TTGGGGCGTT GTGGCAAAAG CGTGGTTTAT CCCTGAGATC GCCAGCCAGT TTTTTACCAT GGGTATGGTG GCCGGCGTTA TTGGCTGCGT GTTTAAGCTC AATGGCTTAA CGCTTAACAA GGTCGCGCAG AGTTTTAAGG ATGGCGCTAA AACCATGTTA GAGCCAGCCC TTTTAGTGGG ATGTGCCTCG GGGATTTTAC TGCTCCTTGG CGGCGGTACA CCGACTGAAC CGAGTGTGCT TAATTCGATT CTGAACAGCG CTGGCGGGGT GATTGGTCAT CTGCCGGATG CACTTTCGGC GTGGTTTATG TTGTTGTTTC AATCCGTATT CAACTTTTTT GTGACCTCGG GTTCAGGGCA GGCCGCATTG ACTATGCCAC TGATGGCACC TCTCTCTGAT ATCGTCGGTG TGACGCGCCA AGTGGCGGTA TTGGCCTTTC AGCTAGGCGA TGGCCTCACC AATATCATAG TGCCCACCTC AGCGTCTTTA ATGGCGACCC TTGGCGTATG CCGCGTCGAT TGGGGCAACT GGCTGAAATT TGTGTGGCGT TTTATGTTGC TGCTGATGTT GGTCTCAAGC GTGCTGGTGA TTGGCGCGCA CTATCTTGGA TTTAACTAG
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Protein sequence | MTTPPSTTQP TEAAQTAMAP SASHAPSSFQ MPDTLVIIFF VALLAGLMTY FIPIGSFQTQ EVHYLAEGVD KARTVVDPNS FAYQLDDAGE PKLQPVALFK GEGGVGFFNF AFEGLTSGSK WGSAIGVIMF MLVIGGSFGV VMATGTIDNG ILKLIDKTRG NEKLFIPVIF TLFSLGGAVF GMGEEAIAFA IIICPLMIRL GYDGITTVMV TYVATQIGFA SSWMNPFSVA IAQGIAGIPV LSGSEFRFPM WLGFTLLGIV FTMRYAHRIQ QQPSISHSYQ SDAYFREHHA NTKLESRFNL GDVLVLLLLV LTMVWVIWGV VAKAWFIPEI ASQFFTMGMV AGVIGCVFKL NGLTLNKVAQ SFKDGAKTML EPALLVGCAS GILLLLGGGT PTEPSVLNSI LNSAGGVIGH LPDALSAWFM LLFQSVFNFF VTSGSGQAAL TMPLMAPLSD IVGVTRQVAV LAFQLGDGLT NIIVPTSASL MATLGVCRVD WGNWLKFVWR FMLLLMLVSS VLVIGAHYLG FN
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