| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1555 |
|---|
| Symbol | |
|---|
| ID | 4478779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 1811301 |
|---|
| End bp | 1813583 |
|---|
| Gene Length | 2283 bp |
|---|
| Protein Length | 760 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639726125 |
|---|
| Product | formate acetyltransferase |
|---|
| Protein accession | YP_869195 |
|---|
| Protein GI | 117920003 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1882] Pyruvate-formate lyase |
|---|
| TIGRFAM ID | [TIGR01255] formate acetyltransferase 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.306811 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA AAACTGAACT GTTTTCCAAC GCATGGGAAG GTTTTACCCC TGGCGATTGG
AAATCTGAAG TCAATGTACG TGACTTTATT CAACAAAACT ATGCTCCCTA TGAAGGTGAC
GAGTCATTCC TAGCCGGTGC CACCGAAGCC ACAACTCAGT TGTGGGACAA AGTGATGGAA
GGCATCAAGC AAGAAAACCG CACCCACGCG CCAGTTGATT TCGATACTAA GATGGTCTCT
ACCATCACTT CCCATGACGC GGGTTATATC AATAAAGATT TAGAAACTAT CGTTGGTTTA
CAAACCGATG CGCCGCTCAA GCGCGCTATG TTACCTAACG GTGGTATTCG CATGGTTGAA
GGCTCATGTG CCGCTTACAA CCGCGAACTC GACGCCGATG TAAAATACAT CTACTCAGAA
CTGCGTAAAA CACACAACCA AGGCGTATTC GACGTCTACA CCCCAGAAAT CATGGCGTGC
CGTAAATCCG GCGTATTAAC TGGTTTACCC GATGCCTATG GTCGTGGTCG TATTATCGGT
GACTATCGCC GCGTAGCGCT CTACGGTATC GACTTCTTAA TGAAGGATAA ATTTGCCCAG
TTCAGCTCAC TGCAAGCGCA GTTCGAAGCC GGCGAAGATT TATCTAACGT TATCCAACTG
CGTGAAGAAA TTGCCGAGCA GCACCGCGCT CTAGGTCAAA TGAAGACCAT GGCGGCTAAA
TACGGTTTCG ATATTTCTCG CCCAGCCGCT AACGCCAAAG AAGCGATTCA ATGGACATAT
TTTGGCTACT TAGCTGCGGT TAAGAGCCAA AACGGCGCAG CTATGTCTTT AGGCCGTACC
TCATCTTTCC TCGATATCTA CATCGAGCGC GATCTGAAAA ACGGCACCAT CACAGAGCAA
CAAGCTCAAG AAATGATTGA CCATTTCGTG ATGAAACTGC GTATGGTGCG TTTCCTACGT
ACTCCAGAAT ACGATGAGTT ATTCTCAGGC GATCCTATTT GGGCAACTGA ATCTATCGGC
GGTATGGGCT TAGATGGCCG TACACTAGTG ACCAAATCCA GCTTCCGTTT CTTAAACACC
TTATACACTA TGGGCCCAAG CCCAGAGCCA AACATCACTG TGCTCTGGTC TGACAAACTG
CCTGTAGGCT TTAAAAAGTA CTGCGCGAAA GTGTCTATCG ACACCAGCTC TATCCAGTAC
GAAAACGATG ACTTAATGCG CCCAGATTTC CAATCTGACG ATTACGCTAT CGCTTGCTGC
GTGAGCCCAA TGGTTGTGGG TAAACACATG CAGTTCTTCG GCGCCCGTGC AAACTTGGCA
AAAACCATGT TGTATGCGAT CAACGGCGGT GTTGACGAAA AACTGAAAAT CCAAATCGCG
CCAAAAGCCG CCCCAATCAC CGACGAAGTG TTGAACTTCG ATGACGTGAT GAATCGTTTA
GACGGCCTGA TGGATTGGTT AGCGACGCAA TATGTCACTG CGCTGAACTC TATTCACTAC
ATGCACGACA AGTACTCCTA CGAAGCTGCG CTAATGGCGC TGCACGACAG AGACGTTCGT
CGTACCATGG CTTGTGGTAT CGCAGGGCTT TCAATCGCGG CCGACTCACT GTCTGCCATC
AAGTACGCTC AAGTTAAACC TGTGCGTGAT GAAAACGGCA TTGCCGTCGA CTTTGAGATC
AGCGGTGATT ATCCAAAATT TGGTAACAAC GACCCACGCG TCGACGATAT CGCCTGTGAC
TTAGTTGAAC GTTTTATGTC GAAGATCCGC GACCGTAAAA TGTACCGCAA CGCTATCCCA
ACTCAGTCAA TTCTGACCAT TACCTCTAAC GTGGTTTATG GTAAGAAAAC CGGTAACACG
CCAGACGGTC GCCGTTCAGG TGCGCCATTT GCACCGGGTG CAAACCCAAT GCACGGCCGT
GATGAGAAAG GTGCGATTGC CTCGTTAACC TCAGTGGCAA AACTGCCTTT TGCCCACGCA
CAGGACGGTA TCTCATACAC CTTCTCCATC GTGCCTAATG CCTTAGGTAA AGATGAAGAC
GGTCGCCGTA CTAACCTCGC GGCGTTGATG GACGGATATT TCGCCCACAA CGAAGGACAC
GAAGGCGGTC AACACTTGAA CGTTAACGTG ATGAACCGTG AAATGCTTGA GGATGCGGTC
GTTAACCCTG ACAAGTATCC GCAACTGACC ATCCGGGTAT CGGGTTACGC AGTGCGCTTT
AACTCTTTGA CCCCAGAGCA GCAGCAAGAC GTGATCACAC GTACTTTCAC AAAAGGTCTG
TAA
|
|---|
| Protein sequence | MTDKTELFSN AWEGFTPGDW KSEVNVRDFI QQNYAPYEGD ESFLAGATEA TTQLWDKVME
GIKQENRTHA PVDFDTKMVS TITSHDAGYI NKDLETIVGL QTDAPLKRAM LPNGGIRMVE
GSCAAYNREL DADVKYIYSE LRKTHNQGVF DVYTPEIMAC RKSGVLTGLP DAYGRGRIIG
DYRRVALYGI DFLMKDKFAQ FSSLQAQFEA GEDLSNVIQL REEIAEQHRA LGQMKTMAAK
YGFDISRPAA NAKEAIQWTY FGYLAAVKSQ NGAAMSLGRT SSFLDIYIER DLKNGTITEQ
QAQEMIDHFV MKLRMVRFLR TPEYDELFSG DPIWATESIG GMGLDGRTLV TKSSFRFLNT
LYTMGPSPEP NITVLWSDKL PVGFKKYCAK VSIDTSSIQY ENDDLMRPDF QSDDYAIACC
VSPMVVGKHM QFFGARANLA KTMLYAINGG VDEKLKIQIA PKAAPITDEV LNFDDVMNRL
DGLMDWLATQ YVTALNSIHY MHDKYSYEAA LMALHDRDVR RTMACGIAGL SIAADSLSAI
KYAQVKPVRD ENGIAVDFEI SGDYPKFGNN DPRVDDIACD LVERFMSKIR DRKMYRNAIP
TQSILTITSN VVYGKKTGNT PDGRRSGAPF APGANPMHGR DEKGAIASLT SVAKLPFAHA
QDGISYTFSI VPNALGKDED GRRTNLAALM DGYFAHNEGH EGGQHLNVNV MNREMLEDAV
VNPDKYPQLT IRVSGYAVRF NSLTPEQQQD VITRTFTKGL
|
|---|
| |