Gene Shewana3_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1531 
Symbol 
ID4477427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1782874 
End bp1783905 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content49% 
IMG OID639726101 
ProductAraC family transcriptional regulator 
Protein accessionYP_869171 
Protein GI117919979 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00128514 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000084673 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTTACAGC GCGTCGACTA CAAGACGAAC CTGATGGTTG GTGATCAAAC CTATCCCGCA 
TTTGAGCTAC GTAATATTCT CGATTTTATT GCCTCGCAGT TAGGCGAAAA CGCCTTACAG
CAAGTCTGTG AGCATATCGG CGTTGGCCAA GCAGAGCTCA ATCATTGCCA GTTTGTGTTT
GTGTGGCAGG TGGAATATGC AATGGAGTTT TTACGCTTGC AGGGCGGCGA CCCCGATATC
GGCACTAAAT TAGGCCTGAG CTATCGGGTG AGTAGTTTAG ATGTGCTCTT GCCCCATCTC
GCACAGCTAA CGTCTTTACA GGCCTGCCTG CAGTTTGTGG TCAATCATCC CCAACTGGTT
GGCAGTTTTA CCGATACCTT AGTGCGCCTC GAGGAAGACT GTGTTTGCAT TCGTTGGCTC
AATACTGGCC GTATCGACCA AGCACAATAT GGATTTCAAT TTCTGCACAG CATAGGTTCG
CTGTTAGGGC TTGCCAGAGA GCTCACGGGG GAGGCGATAA CGCTTAGGCA AATCCATTTG
GCGGAACCTG TCCGTGACAG CTATTTTTTA AATGAAGCCA CCGGTGCTCA AGTGCAGTTT
AATTGCGAAT ATTACGAATG GAGCATTTCC CTTAACCATC TTGCGCTTGC TATCCAGTAT
CCTTTCCCTG CCTACGCCGA AAAGGTCACT GCTGTCTCGA CCACATCCTT TATCGAAACC
GTGCTGGCGG CAATCAACGA ACATTTTCCC CAAGTGCTCC ATTTAGATGA TATGGCGGCG
CAACTGCATA TGAGCGATCG CAGTTTTCGG CGCAAGCTGG CACAGCTTGG TTCGAGTTAT
CAACGTTTAG TCGATCAGGT GCGTTGCCAA AGGGCGGTCG AGTTGATTTT AGCAAGCGAA
TTGGATATTG AGGCGATTGC CGAGACCCTA GGCTACAGCG ATGTTAGCCA TTTTCGTCAA
TCCTTTAAGC ATTGGATTGG CCATCCGCCT GGATATTTTA GCCGGCTAAA TGGTGGTGAA
AGGGCTAACT AA
 
Protein sequence
MLQRVDYKTN LMVGDQTYPA FELRNILDFI ASQLGENALQ QVCEHIGVGQ AELNHCQFVF 
VWQVEYAMEF LRLQGGDPDI GTKLGLSYRV SSLDVLLPHL AQLTSLQACL QFVVNHPQLV
GSFTDTLVRL EEDCVCIRWL NTGRIDQAQY GFQFLHSIGS LLGLARELTG EAITLRQIHL
AEPVRDSYFL NEATGAQVQF NCEYYEWSIS LNHLALAIQY PFPAYAEKVT AVSTTSFIET
VLAAINEHFP QVLHLDDMAA QLHMSDRSFR RKLAQLGSSY QRLVDQVRCQ RAVELILASE
LDIEAIAETL GYSDVSHFRQ SFKHWIGHPP GYFSRLNGGE RAN