Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1531 |
Symbol | |
ID | 4477427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1782874 |
End bp | 1783905 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639726101 |
Product | AraC family transcriptional regulator |
Protein accession | YP_869171 |
Protein GI | 117919979 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00128514 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000000084673 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTTACAGC GCGTCGACTA CAAGACGAAC CTGATGGTTG GTGATCAAAC CTATCCCGCA TTTGAGCTAC GTAATATTCT CGATTTTATT GCCTCGCAGT TAGGCGAAAA CGCCTTACAG CAAGTCTGTG AGCATATCGG CGTTGGCCAA GCAGAGCTCA ATCATTGCCA GTTTGTGTTT GTGTGGCAGG TGGAATATGC AATGGAGTTT TTACGCTTGC AGGGCGGCGA CCCCGATATC GGCACTAAAT TAGGCCTGAG CTATCGGGTG AGTAGTTTAG ATGTGCTCTT GCCCCATCTC GCACAGCTAA CGTCTTTACA GGCCTGCCTG CAGTTTGTGG TCAATCATCC CCAACTGGTT GGCAGTTTTA CCGATACCTT AGTGCGCCTC GAGGAAGACT GTGTTTGCAT TCGTTGGCTC AATACTGGCC GTATCGACCA AGCACAATAT GGATTTCAAT TTCTGCACAG CATAGGTTCG CTGTTAGGGC TTGCCAGAGA GCTCACGGGG GAGGCGATAA CGCTTAGGCA AATCCATTTG GCGGAACCTG TCCGTGACAG CTATTTTTTA AATGAAGCCA CCGGTGCTCA AGTGCAGTTT AATTGCGAAT ATTACGAATG GAGCATTTCC CTTAACCATC TTGCGCTTGC TATCCAGTAT CCTTTCCCTG CCTACGCCGA AAAGGTCACT GCTGTCTCGA CCACATCCTT TATCGAAACC GTGCTGGCGG CAATCAACGA ACATTTTCCC CAAGTGCTCC ATTTAGATGA TATGGCGGCG CAACTGCATA TGAGCGATCG CAGTTTTCGG CGCAAGCTGG CACAGCTTGG TTCGAGTTAT CAACGTTTAG TCGATCAGGT GCGTTGCCAA AGGGCGGTCG AGTTGATTTT AGCAAGCGAA TTGGATATTG AGGCGATTGC CGAGACCCTA GGCTACAGCG ATGTTAGCCA TTTTCGTCAA TCCTTTAAGC ATTGGATTGG CCATCCGCCT GGATATTTTA GCCGGCTAAA TGGTGGTGAA AGGGCTAACT AA
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Protein sequence | MLQRVDYKTN LMVGDQTYPA FELRNILDFI ASQLGENALQ QVCEHIGVGQ AELNHCQFVF VWQVEYAMEF LRLQGGDPDI GTKLGLSYRV SSLDVLLPHL AQLTSLQACL QFVVNHPQLV GSFTDTLVRL EEDCVCIRWL NTGRIDQAQY GFQFLHSIGS LLGLARELTG EAITLRQIHL AEPVRDSYFL NEATGAQVQF NCEYYEWSIS LNHLALAIQY PFPAYAEKVT AVSTTSFIET VLAAINEHFP QVLHLDDMAA QLHMSDRSFR RKLAQLGSSY QRLVDQVRCQ RAVELILASE LDIEAIAETL GYSDVSHFRQ SFKHWIGHPP GYFSRLNGGE RAN
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