| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1528 |
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| Symbol | |
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| ID | 4477424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1778066 |
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| End bp | 1778803 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639726098 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_869168 |
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| Protein GI | 117919976 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.272639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000286481 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGGAAT ATCAAGCAGC AAAAGATTTA CTCCAAGGTA AAACCATCCT GGTGACAGGC
GCTGGCGCAG GTATCGGTCG CGCGGCGGCC ATTGAATTTG CCAAACACGG TGCTACCGTG
ATTTTACTCG GTAAAACCGT CAAAAAACTC GAAGCCGTAT ACGATGTAAT CGAACAGGCG
GGTTACCCAA CGCCAGCGAT CGTGCCGTTG GATTTAAAAG GCGCCACCGA ACAAAACTAC
CGCGATATGG CCGAAACCAT TGGCGAGCAG TTTGGTCATT TAGATGGTTT ACTGCACAAC
GCTAGTTTAC TCGGCGCCTT AGGTCCGTTT GAACACATCG ATATTCCATC ACTCGAAGAT
GTACTTAAAG TCAACGTCAC CTCACAGGTC ATGCTGACCA AGGCCTTATT GCCTATTATG
CGTCAAGCAC CCAGTGCCTC GATTATCTTT ACCTCAAGCA GTGTTGGCCG TCAGGGCCGC
GCCTACTGGG GCCCCTATGC CTTCTCTAAA TTTGCAACCG AAGGTATGAT GCAAGTACTC
GCCCACGAAT GTGATGGCAC TTCTGTACGC GTTAACAGCA TTAATCCAGG TGCGACTCGC
ACCGAAATGC GTGCTAAAGC ATACCCTGCC GAAAATCCAT TAGATTTAAA AACGGCCGAA
GAAATCATGC CAACTTACCT CTATTTAATG GGGCAAGATT CTAGCGAAAT TAACGGTCAG
CAATTTAACG CTCAATAA
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| Protein sequence | MLEYQAAKDL LQGKTILVTG AGAGIGRAAA IEFAKHGATV ILLGKTVKKL EAVYDVIEQA
GYPTPAIVPL DLKGATEQNY RDMAETIGEQ FGHLDGLLHN ASLLGALGPF EHIDIPSLED
VLKVNVTSQV MLTKALLPIM RQAPSASIIF TSSSVGRQGR AYWGPYAFSK FATEGMMQVL
AHECDGTSVR VNSINPGATR TEMRAKAYPA ENPLDLKTAE EIMPTYLYLM GQDSSEINGQ
QFNAQ
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