Gene Shewana3_1522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1522 
Symbol 
ID4477418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1773237 
End bp1773857 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content48% 
IMG OID639726092 
Producttranslation factor SUA5 
Protein accessionYP_869162 
Protein GI117919970 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0107346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGT TTTTTTATGT ACACGAAGTA AATCCACAGG TACGCCTGAT CAGTCAAGCA 
GTGGCTGTGC TTAAGTCCGG CGGTGTGATT GTATATCCAA CCGATTCGGG CTATGCCCTC
GGTTGTATGA TTGGCGAGAA AGACGCGATG ACGCGCATTA CCCGCATTCG TCAAATCGAG
CATGACCATA ATTTCTCGTT AATGTGCCGC GACTTATCCG AGTTAGCGAC CTATGCCAAG
GTGGATAATC AGGCCTACCG CATCTTAAAA AGCTGCACGC CTGGACCTTA CACTTTCATC
TTTAAGGCGA GCAAGGAAGT ACCCCGTCGT CTGCAAAATG ACAAGAAGAA AACCATAGGT
ATCCGCGTGC CTGATAATAT TATTGCCTTA GCTCTGCTCG AAGCGTTAGA TGCGCCGCTG
ATGTCGACCA GTTTGGTGAT GCCAAATAGT GATTTTGCTG AATCTGATCC TGAGCACATT
CGCGATCTGT TAGAACATCA AGTGGATGTG ATTATTCACG GCGGTTATTT AGGTGAAAAA
CCGACCACGG TCATTGATAT GTCGGAAGAT GGTTTCGAAG TGCTGCGTGA AGGCGCGGGT
GATGTGACCC CCTTTCTCTA A
 
Protein sequence
MSQFFYVHEV NPQVRLISQA VAVLKSGGVI VYPTDSGYAL GCMIGEKDAM TRITRIRQIE 
HDHNFSLMCR DLSELATYAK VDNQAYRILK SCTPGPYTFI FKASKEVPRR LQNDKKKTIG
IRVPDNIIAL ALLEALDAPL MSTSLVMPNS DFAESDPEHI RDLLEHQVDV IIHGGYLGEK
PTTVIDMSED GFEVLREGAG DVTPFL