| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1514 |
|---|
| Symbol | |
|---|
| ID | 4477410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 1763877 |
|---|
| End bp | 1764932 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639726084 |
|---|
| Product | putative esterase |
|---|
| Protein accession | YP_869154 |
|---|
| Protein GI | 117919962 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2819] Predicted hydrolase of the alpha/beta superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00321061 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.816657 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATACT TTTTAGTTGT AGTCGGTTTA TTGATGGGGA GCGTGATATC ACAGCCAACT
GCGGCGGTGG AATATCAAAG CCAGCAATTG CAGTCCAAAC TGCTTAAGGA AACACGGCAG
TATCTGATTG CACTTCCTGA GGGATATGCA CAAGCGACTG AGGCGTATCC CGTTGTTTAT
CTACTTGATG CAGATGAACA ATTTGATCAT ATGGCAAGCT TGCTGCAATT TTTAAGTCAA
GGCGCTATGC CGCAAATCCC TAAGATGATT ATTGTTGGCA TTAATAACAC CGAAAGGATG
CGGGATTACA CTCCGACCCA TACGCTGGTG TTGCCGAGTG GGAAAAAAGG CAATCCCAAA
TACCAGCAAA CGGGGGGCGC GGGGCGATTT TTAGATTTTA TCGAGCAGGA ATTAGCGACG
AGCATACATA GTCAGCTGCG AACCAATGGT ATTAATGTGT TGGTGGGCCA CTCCTTTGGG
GGCTTATTAG CGATGGAAGC GCTGCGTACC GACAGGCAAC TTTTTTCGGC CTATATCGCC
ATTGATACTA GTCTGTGGTT TGACAGCCCA CATTACCTCA CTCAGCTCGA AAACCGAGTT
GAAAAGGGCG ATTTCAAGCA GAAACAACTC TTTATGGCGA TTGCAAATAA TCCCTTGTCA
CCGGGATTTG GCGTGTCTTC CTATCATAGA GATTTAAATT TGGCCTTTGC GGACAAGCTG
ACCAAAAGTC CCCCTCAAGG GCTGAGTTTT GCGGCCCAAT ACTATCCCGA CGAGACACAT
CAGAGTGTGA GTCATATAGG TTTATACGAT GGTATTCGCC ATCTGTTTAA AGACTTCGCC
ATCGATATCT ATGCCGAGAC GTTTAGTAAG CAGCAAGTGA TTGACCAATA TCAATTATTA
TCGGAGCGCT TTGGCTTGAG GGTGACTCCA CCTCAGCAAT ACCTCGAGCA GTTGATCCAA
TATAGCGAGA GACAACAGCT CAGCGATCGC AGACAAAGTC TTGAGTCATT GAAAGCGTAT
TTTGCTGATG TTAAGTCAAA TGAGGCACTG AGGTAG
|
|---|
| Protein sequence | MRYFLVVVGL LMGSVISQPT AAVEYQSQQL QSKLLKETRQ YLIALPEGYA QATEAYPVVY
LLDADEQFDH MASLLQFLSQ GAMPQIPKMI IVGINNTERM RDYTPTHTLV LPSGKKGNPK
YQQTGGAGRF LDFIEQELAT SIHSQLRTNG INVLVGHSFG GLLAMEALRT DRQLFSAYIA
IDTSLWFDSP HYLTQLENRV EKGDFKQKQL FMAIANNPLS PGFGVSSYHR DLNLAFADKL
TKSPPQGLSF AAQYYPDETH QSVSHIGLYD GIRHLFKDFA IDIYAETFSK QQVIDQYQLL
SERFGLRVTP PQQYLEQLIQ YSERQQLSDR RQSLESLKAY FADVKSNEAL R
|
|---|
| |