Gene Shewana3_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1510 
Symbol 
ID4477406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1758470 
End bp1759960 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content50% 
IMG OID639726080 
Productsiderophore biosynthesis protein 
Protein accessionYP_869150 
Protein GI117919958 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3486] Lysine/ornithine N-monooxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTACCC CAAAAAAGGA AAACGATCGC AGGATTCTCG ATCTACTCGG TATCGGCATA 
GGTCCGTTCA ATCTCGGATT AGCCGCCCTG AGTGAACCCA TCGATGGCTT TAGCTGTTTG
TTTCTTGATG CCAAAATCGA GTTTGACTGG CACCCGGGCA TGCTGCTCAG CGCTTCTCGG
CTGCAAACAC CGTTTATGTC CGACTTAGTG ACCATGGCCG ATCCCACAAG TCGCTATAGT
TACCTGAATT TTGCCAAGCA AACTGGCAGG CTGTATCCCT TTTATATCCG TGAAAACTTT
TTCCTGCCGC GAAATGAGTA TAACCAGTAT TGTCAATGGG TTAGCAAACA GCTCTCCAAT
CTGAGATTCG GTTTTAAGGT CACCCAACTA GATTACAACG CCGGTGAAGG TATTTACCAT
GTTACGGGGG TTGATAGACG CAGCGGCCAG CCCCAAACCT ATTTGTGCCG CAAACTGGTA
CTCGGCACGG GCACCACGCC CTACGTGCCA GACAATTGCC CGATGCACGA TCCCCGCGTG
ATGCACAGCG CCAGCTATAT GCAGCAGAAA ACTTACCTGC AGAGCCAAAG CGCCATTACC
GTGATCGGCA GTGGTCAAAG CGCGGCAGAA ATCTTTTACG ATCTGTTGCA AGATATTGAT
ACCTATGGTT ATCAATTAAA TTGGATGACC CGCTCGCCAC GCTTCTATCC GCTGGAATAC
ACCAAACTCA CCCTAGAAAT GACTTCGCCA GATTATGTGG ATTACTTCCA CGAACTGTCG
CCAGAGAAAC GCAGCCGATT GATTGCAAAT CAAAAATCCC TCTACAAGGG GATCAATGCC
GAGTTAATCA ACGATATTTA TGATCTGCTT TACCAAAAAC GTTTAGTCAG TGATATCCAA
TGCCAGCTGC TGACCAACGT GGCACTCGAT AAGATAGAAA CCTCGGGCGA CAAGCTAACG
CTCAAATTCA ACCACTTCGA ACAGGAATAT GCCCTCGAGC AACAGACGGG CGCCGTCGTC
TTAGGCACTG GCTATCAATA TCGTTTACCC GAATTTATTC AAGGAATTAA ATCACAAATT
GAATTTGATG ATCGCGGCCA ACTCGCCATC CAGCGGGATT ATGGCATCGA TATCAGAGGC
GATATTTTCA TCCAAAATGC GGGCCTGCAT ACCCATGGCA TCAGCTCACC GGATCTGGGC
ATGGGCTGCT ATCGCAATGC GACGATTCTG CAAGCGGTTT TAGGTTACGC ACCCTATCCG
ATTGAAGACA GTATCGCCTT CCAAACCTTC GACCCAACCA AGATCCGCGC GCAGCAAAAC
CAGCCCACCA GCAGCCCCCA CTCAGCCATA ACAGCCACAC CAAGCAAGAC GGTATCTTCG
GCGGCGCAAC CTACGCAGCA TCGTAATGTT GAGCCACTGG CCGCGTTGCG GATAAGTCCT
TCGGGCGGCA GCGTGTCGGT GTTGATGGCA CCCCACAAGG AGGCGCAGTA A
 
Protein sequence
MTTPKKENDR RILDLLGIGI GPFNLGLAAL SEPIDGFSCL FLDAKIEFDW HPGMLLSASR 
LQTPFMSDLV TMADPTSRYS YLNFAKQTGR LYPFYIRENF FLPRNEYNQY CQWVSKQLSN
LRFGFKVTQL DYNAGEGIYH VTGVDRRSGQ PQTYLCRKLV LGTGTTPYVP DNCPMHDPRV
MHSASYMQQK TYLQSQSAIT VIGSGQSAAE IFYDLLQDID TYGYQLNWMT RSPRFYPLEY
TKLTLEMTSP DYVDYFHELS PEKRSRLIAN QKSLYKGINA ELINDIYDLL YQKRLVSDIQ
CQLLTNVALD KIETSGDKLT LKFNHFEQEY ALEQQTGAVV LGTGYQYRLP EFIQGIKSQI
EFDDRGQLAI QRDYGIDIRG DIFIQNAGLH THGISSPDLG MGCYRNATIL QAVLGYAPYP
IEDSIAFQTF DPTKIRAQQN QPTSSPHSAI TATPSKTVSS AAQPTQHRNV EPLAALRISP
SGGSVSVLMA PHKEAQ