Gene Shewana3_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1508 
Symbol 
ID4478145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1755913 
End bp1757808 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content51% 
IMG OID639726078 
ProductIucA/IucC family protein 
Protein accessionYP_869148 
Protein GI117919956 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4264] Siderophore synthetase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTAG CCACTAACCG CGCATTACTC ACGCCATTCA CTCAAGCCGA ATTCCCCACG 
CTGGAGGCCG CTGCCCACAG GCATGTTCCC GCCCACTTAA TACCGGAATA TTGGCAGGCG
GCCAATCGCC ATTTGGTGAA GAAAATTCTC TGTGAATTTA CCCATGAGAA GATCATCACC
TCACAGATAT ACCGCCAAGC GGCAGGCATC AATCACTATG AACTGAGGCT CAAGGACTGT
ACCTATTACT TCAGTGCGCG CCATTATCAG CTCGACCACC TTGAGATAGA AACCGGGTCG
ATTCGAGTCA GCAGCGCGGG CCAAGACAAG CCACTCGATG CCATGAGTTT GATTATCAAA
CTGAAAGATG CCTTGGGCAT GAGTGAAACC CTGCTGCCAA CCTATCTGGA GGAAATCACC
AGTACCCTCT ACAGCAAGGC CTACAAGTTG GCCCATCAAG CCATCCCCGC CGCAACACTC
GCTAAGGCCG ATTATCAAAC CATTGAGGCG GGCATGACCG AGGGGCACCC AGTGTTTATC
GCCAACAATG GCCGCATTGG TTTTGATATG CAGGACTATG ACCAATTTGC CCCCGAGAGT
CCCAGCGCGC TCCAGCTAGT GTGGATTGCA GTGCGTAAGG ACAATACCAC CTTCTCCGCC
CTCGAAGGAT TAGACCATGA TAGCTTGTTA AAACAGGAGC TTGGCGAACA GTTCTCCGAG
TTTCAACAAC ACTTAAGCGC ACAGGGGCAA GCGGCCGACG GCTTTTATTT TATGCCCGTT
CATCCTTGGC AGTGGCGCGA AAAAATTGCC CGCACTTTTG CTGGCGAAAT CGCCGGCGGC
GACATTATTT ATCTCGGCGA AAGCCAAGAT TGCTATCAAG TTCAACAATC GATCCGCACC
TTCTTTAACT TAAGCGCGCC GCAAAAATGC TACGTCAAAA CCGCGCTTTC TATCTTAAAC
ATGGGCTTTA TGCGTGGGCT TTCGCCGCTG TATATGAGCT GCACCCCGCA GATCAACGCT
TGGGTGGCCG ACCTTATCGA AAGCGACAGC TATTTTGCCG AACAAGGTTT TGTGATCCTC
AAGGAAATCG CTGCAATTGG TTATCACCAC AGATATTATG AAGAGGCACT CACCCAAGAT
AGCGCCTATA AGAAAATGCT GTCGGCGCTG TGGCGCGAGA GTCCGCTGCA GCACATTGAG
CCGCAGCAAA CCCTGATGAC CATGGCGGCG TTATTACACG TCGATCATCA GGAGCAAGCC
CTGCTTGCCG CCTTAATCAC GCACTCGGGC TTAAGCGCCA AGGAGTGGGT CAAGCGCTAT
CTCAACCTCT ACTTATCACC GCTATTGCAC GCCTTCTTTG CCTACGATCT GGTGTTTATG
CCCCATGGCG AGAACCTGAT TTTAGTGCTC GATGCTGGCA TCCCGGTCAA AATATTGATG
AAGGATATCG GCGAAGAAGT CGCAGTACTC AACGGCAGCG AGCCACTGCC GCAAGAAGTA
CAGCGCCTTG CGGTCGAGCT TGAGGAAGAG ATGAAGCTCA ACTATATCTT GCTCGATATT
TTCGACTGTA TTTTCCGTTA TTTAGCGCCA ATTCTGGATA AGCAAACCGA GGTCAGCGAA
GCGCTGTTTT GGGAGTTGGT GGCAGACAAT GTGCGCGACT ATCAAGCGCA GCATCCGCAG
TTGGCGGACA AATTTGCACA ATACGATCTC TTTAAAGACA GCTTCGTTCG CACTTGCCTG
AATCGCATTC AGCTTAATAA CAACCAGCAG ATGATTGACC TAGCCGACCG GGAAAAAAAT
CTGCGCTTTG CGGGCGGGAT TGATAATCCG CTGGCCGCCT TCAGGCAAAG CCATGCCTTT
GGCTCAGCAA ATCAGAAGCT CAAACCCAAC CCCTAA
 
Protein sequence
MNLATNRALL TPFTQAEFPT LEAAAHRHVP AHLIPEYWQA ANRHLVKKIL CEFTHEKIIT 
SQIYRQAAGI NHYELRLKDC TYYFSARHYQ LDHLEIETGS IRVSSAGQDK PLDAMSLIIK
LKDALGMSET LLPTYLEEIT STLYSKAYKL AHQAIPAATL AKADYQTIEA GMTEGHPVFI
ANNGRIGFDM QDYDQFAPES PSALQLVWIA VRKDNTTFSA LEGLDHDSLL KQELGEQFSE
FQQHLSAQGQ AADGFYFMPV HPWQWREKIA RTFAGEIAGG DIIYLGESQD CYQVQQSIRT
FFNLSAPQKC YVKTALSILN MGFMRGLSPL YMSCTPQINA WVADLIESDS YFAEQGFVIL
KEIAAIGYHH RYYEEALTQD SAYKKMLSAL WRESPLQHIE PQQTLMTMAA LLHVDHQEQA
LLAALITHSG LSAKEWVKRY LNLYLSPLLH AFFAYDLVFM PHGENLILVL DAGIPVKILM
KDIGEEVAVL NGSEPLPQEV QRLAVELEEE MKLNYILLDI FDCIFRYLAP ILDKQTEVSE
ALFWELVADN VRDYQAQHPQ LADKFAQYDL FKDSFVRTCL NRIQLNNNQQ MIDLADREKN
LRFAGGIDNP LAAFRQSHAF GSANQKLKPN P