| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1507 |
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| Symbol | |
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| ID | 4478144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1753615 |
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| End bp | 1755828 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639726077 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_869147 |
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| Protein GI | 117919955 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.681157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTA AGATCATTAT TATGAAAACC TTCCCCCTCA ACAGCCTCGC GGCGCACTGC
CAACTCGCCA TCACACGCCC TGAGCTTATC CTCTGCTCTG CCATACTCAG CATGCCCTAT
GCTTATGCCG ATGCCAGCGA TACCCAGAAA AAATCCACCA AAGACATTGA AATCATTAAT
GTCGTTGGCG CTAAGGATCT CCACGATAAT CGCTACAAAA CTCAGGCGAT GAATACGGCA
ACGGGCTTAG ATTTGTCCTA TTTAGAGACG CCGCAATCCG TCACCTCTGT GACTAGCCAA
ATGATGCATG ACCAGCAACT AAACAGCGTG ATCGACGCCA TGACTAGCGT AGCAGGCATC
AACGCTCGGC CGATGGACAA CGACAGGTAC AGCATCAGCT CCCGCGGGAT TGCGGTCACC
AGTATTCTTT ACGATGGCGT GCCCACCACC TATGACACCC GTTTTAACTA CGGCGATAAC
CTTATCGATA CCGCCATCTA CGAGCGGGTG GAAATTGTAC GTGGCGCCAC AGGATTAATG
ACGGGTGCGG GTAATCCCTC GGCCGCGATT AACCTTATTC GTAAACGCCC GACACAAGAA
TTTATGGGCA GCACCTCAGT GAGTGTTGGC TCATGGAACA ATCTGCGCGG CATGGTCGAT
TTATCAAGCG GCTTAAATGA CAGTGGCAGC ATTCGTGGCC GTGTTGTCGC CGCCTATCAG
GATAAGGAAT CCTTCCAAGA CAGATATGAG CAGCAACGCA CCACCCTCTA TGGCATTGTT
GAAGCCGATA TTACCGCCAG CACATTGCTG ACCTTAGGCG TGGATTATCA AGACACCACG
CCCGAAGGCA CTATGTCCGG CGGTCTGCCG CTGTTCCACA GTGATGGCAG CCGTACAAAT
TACGATCGCG CGACCTCCAC CGCCCCCGAT TGGGCCTCGG CGCATACCCA AGGACTCAAT
ACCTTCGCCA GCCTTGAACA TCGTTTTGAT AACGGTTGGG AGCTAAAAGG CACCTACAGT
TACGGCGATA ACTCACTGAA ATACGATGTA CTCTGGGCTA CGGGGTATCC CGATCCGGTA
ACAAACATAG GCGCAACCGC AGGCTCAATC GCCTATGTCG ATGGTAGTCG TACCCAACAT
AACCTCGACT TACGGGCACA GGGAATGTTT GCCCTGTTTG GCCAAGAGCA CCAGCTCACC
TTTGGCTGGA CGGGTCAGCG CCAAGAGTTT GCCAACCCTT ACTATTATCC TACGGCCGCC
GTACCGCCCT TAGGGGATTT TCGCGATCCC AACTTCCAGT ATCCAAAACC TCAGTGGAAG
GAGACTCACA CCACGGGAAC CTTCGGCGAA ACCGAACAAA GCGCCGCCTA TGTGGCCACG
AAGCTTAATC TGACCGATGC CTTGGCATTG CTTGCGGGGC TGCGCCTGAA CAAGTGGCAA
ACCGACCAAG ATAACTTTGG CAGCATGTAT GACTTTAAGG TCGACAATGA GCTCACCACC
TATTTTGGCC TGACCTACGC ACTCGGCGAG CAATACTCCC TCTACGCCAG TTATACGGAT
ATTTTTGCGC CGCAAACCTT GCAGCGCATC GATGCCAGCT ACATCGACCC CGTCAAAGGT
AAAAACTACG AGGCGGGTAT TAAGGCCAGC TTGATGGATG AAAGCTTAGA TATGTCGTTG
TCGGTATTTG AAATTCGCCA AGACAATGTT GGTGAACGCA CTGGCGATGT GTTGCCGGGC
ACCACTATTC CAGTATATCG AGAGGTTAAC AGCACTAAAA CCCAAGGCTT TGAGTTTGAA
TCCACGGGCA AAATCACCGA TGACTGGAAT ATCTACTTCG GCTACACCCA ATTCAGCACC
GATGACCCTA AGGGCAATCG CATCAACACC ACTTCCCCTC GCCAGCAGCT AAAACTCTTT
ACCACTTATA CCTTTAGCGG CGATTGGAAC AAATTGCAGC TTGGCGCTGG GGTCAATTGG
CAAAGCCGTG TCTACCAAAC CGTGAACTCG CCCTTAGGCA GAGTCGAGGT TGAGCAAGAC
TCCTACGCGT TAGCCAGCTT AATGGCAAGT TATGCCTTTA CCGAGCAGCT AAAGCTAAGC
GCCAATGTGC ACAACGCCTT AGATAAAACC TACTACAGCC AAGTGGGGCA ATATAGCCAA
TTCCAATACG GCGCCCCACG CAGCATGAGT GTGAATTTGG ATTATCGCTT CTAA
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| Protein sequence | MEFKIIIMKT FPLNSLAAHC QLAITRPELI LCSAILSMPY AYADASDTQK KSTKDIEIIN
VVGAKDLHDN RYKTQAMNTA TGLDLSYLET PQSVTSVTSQ MMHDQQLNSV IDAMTSVAGI
NARPMDNDRY SISSRGIAVT SILYDGVPTT YDTRFNYGDN LIDTAIYERV EIVRGATGLM
TGAGNPSAAI NLIRKRPTQE FMGSTSVSVG SWNNLRGMVD LSSGLNDSGS IRGRVVAAYQ
DKESFQDRYE QQRTTLYGIV EADITASTLL TLGVDYQDTT PEGTMSGGLP LFHSDGSRTN
YDRATSTAPD WASAHTQGLN TFASLEHRFD NGWELKGTYS YGDNSLKYDV LWATGYPDPV
TNIGATAGSI AYVDGSRTQH NLDLRAQGMF ALFGQEHQLT FGWTGQRQEF ANPYYYPTAA
VPPLGDFRDP NFQYPKPQWK ETHTTGTFGE TEQSAAYVAT KLNLTDALAL LAGLRLNKWQ
TDQDNFGSMY DFKVDNELTT YFGLTYALGE QYSLYASYTD IFAPQTLQRI DASYIDPVKG
KNYEAGIKAS LMDESLDMSL SVFEIRQDNV GERTGDVLPG TTIPVYREVN STKTQGFEFE
STGKITDDWN IYFGYTQFST DDPKGNRINT TSPRQQLKLF TTYTFSGDWN KLQLGAGVNW
QSRVYQTVNS PLGRVEVEQD SYALASLMAS YAFTEQLKLS ANVHNALDKT YYSQVGQYSQ
FQYGAPRSMS VNLDYRF
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