Gene Shewana3_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1493 
Symbol 
ID4478130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1740538 
End bp1741182 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content48% 
IMG OID639726063 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_869133 
Protein GI117919941 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACC AAATTATTCC TGTGACACCT TTCCAGCAGA ATTGCAGCTT GATCTGGTGT 
GAAAAAACGA AGCGTGCTGC GGTTGTCGAT CCGGGAGGGA ATGTCGACCG TATTCTAGGC
GAAATGAACA AATTGGGGCT CACCCTCCAA AAAATCTTAC TCACTCATGG TCATATTGAT
CATGTGGGTG GCGCTAAATC ATTAGCCCAG CAAACAAATG TGCCCATAGT GGGCCCCCAT
GTAGCGGATA AGTTTTGGAT TGATAATCTG CCCAAGCAGA GCCAAAACTT TGGGTTTCCC
CACTGTGATG CCTTTGAGCC AGAGCAATAT TTGCAGGATG GCGATGTAGT CACTGTGGGT
GAGCAAAGCT TAAAAGTGTT GCATTGCCCT GGGCATACTC CGGGACACGT GGCATTTTAT
TCTGCGGACG CGCATCTGGC TTGGGTGGGC GATATTCTGT TTAGGAGCTC GATTGGCCGT
ACGGATTTTC CGCAATCTAA TCATCAGGAT TTAATCCAAT CCATTACCAC TAAACTCTGG
CCTTTAGGGG CGGATGTGGA ATTTATTCCT GGCCATGGTC CTATGTCGAC CTTTGGGGAA
GAGCGCGAAC ACAACCCCTT TGTGGCCGAT CAATTATTAC TCTAG
 
Protein sequence
MKYQIIPVTP FQQNCSLIWC EKTKRAAVVD PGGNVDRILG EMNKLGLTLQ KILLTHGHID 
HVGGAKSLAQ QTNVPIVGPH VADKFWIDNL PKQSQNFGFP HCDAFEPEQY LQDGDVVTVG
EQSLKVLHCP GHTPGHVAFY SADAHLAWVG DILFRSSIGR TDFPQSNHQD LIQSITTKLW
PLGADVEFIP GHGPMSTFGE EREHNPFVAD QLLL