| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1488 |
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| Symbol | |
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| ID | 4478125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1733503 |
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| End bp | 1735029 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639726058 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_869128 |
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| Protein GI | 117919936 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAC ACTTCTATTA CGAATCAACC CTAAGACTCT GTAGCAGTCT GCAGCTCGAA
AAATCGTTGC ACAGTTACTT CGAGTTTATT CGGAATGAAC TGCCTATTGA CGGGCTATTT
GTGAATATTT TTCGCAAACA ATTTAATGAT ATACAGTTTA TCGCCCATGT TGATGATAGC
CATTGCTGCA CGTTAGATAA GCGCATCCAA ATTCCTGAGA AGATGGCGCA ATACTTAGAA
GATCCCGAGC GACCAAGGGT TAGAATTGTT AACGACATAG AGCATGATCC TGTCACCTCT
TTAGTCGCAC CACAGGTGAT TAAAGACATT CGCTCGGTGA TTATTCTGCG AATGTCGATA
GAAAATACCC ACCTTGGGAT AGTTGGCTTT TATGCCAAAA GCACTGGAGT GTTTAGGCCC
CGCCATGCCG ACTTAATCGC GCCGCATATG CAAAACCTAG CACTGATCAC GGCGCTGAAT
TTAAGGGATC GCAACTTACT CAAAGAGAAC GAAGCGCTCT CGAAGCAAAA CGTGAGTCTG
CGTCGTACCT TAGATATTCA AAATGGCGTG GTTGGCGCCA ATTCTGGCCT GAAACAGGTC
ATGCAACAGG TGCAATCTAT CGCCAAAATC AACACCACAG TGTTAATGCT TGGGGAAACG
GGCTGCGGCA AGGAAGTCAT CGCCAACGCC ATTCACGAAT TGTCGGAGCG CTCGGGTAAG
CCTTTTATCA AGGTAAACTG CGGCGCCATC CCAGATACCT TGATTGACTC CGAGCTTTTT
GGTTATGAAA AAGGCGCATT TACCGGCGCC GATTCGCGCA AAGTTGGCTA CTTCGAGCAG
GCCAACGGCG GCACCATTTT CTTAGATGAG ATAGGGGAAT TGCCGCTTTC GGCTCAAGTT
CGACTACTTA GGGTACTGCA AAATAGTTGT ATCACCCGCG TTGGCGGTCA CGATGCGGTT
CAGCTCGATA TTCGTATTGT GGCCGCAACC CACAGAAACC TTCAGGCCAT GGTGCACAGA
GAAGTGTTTC GCGAGGATCT CTGGTATCGG CTGGCGATTT TCCCCATCGA GATCCCATCA
CTCAGACAAA GACGCACAGA TATACCTCTG CTGGTACAAC ATTTTATCGA GCAGCTCAGT
GCCAAATTCA ATTTACCGCA GCTGCCAAGA ATCGCCCCAG AACAACTGAA TATTCTCAAC
CAATATGGTT GGCCAGGGAA TGTGCGCGAA CTCATTAATG TGCTCGAGCG CGCCATCATT
CAGCACCCTG CAGGGCCGCT GGATTTTAGT TTTCTAGCAC CAAAGAGCCT CGAAGCCGTT
AAAACGCCAT CCAATCAAAC CGTGATTATC GATCCAAGTC ATGCCAGCGA TAAGCTGGTG
CCGCTGGAAG TGATGACCAA AAAATACATC AGCCATGCCT TAAGGATCAC GGGGGGTAAA
CTCTATGGCC CAGGCGGCGC CGCCGAGTTG CTGGATATCA ATGCCAATAC CCTGCGCAGT
AAAATGAAGA AGTTAGGGAT TGTGTAA
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| Protein sequence | MEKHFYYEST LRLCSSLQLE KSLHSYFEFI RNELPIDGLF VNIFRKQFND IQFIAHVDDS
HCCTLDKRIQ IPEKMAQYLE DPERPRVRIV NDIEHDPVTS LVAPQVIKDI RSVIILRMSI
ENTHLGIVGF YAKSTGVFRP RHADLIAPHM QNLALITALN LRDRNLLKEN EALSKQNVSL
RRTLDIQNGV VGANSGLKQV MQQVQSIAKI NTTVLMLGET GCGKEVIANA IHELSERSGK
PFIKVNCGAI PDTLIDSELF GYEKGAFTGA DSRKVGYFEQ ANGGTIFLDE IGELPLSAQV
RLLRVLQNSC ITRVGGHDAV QLDIRIVAAT HRNLQAMVHR EVFREDLWYR LAIFPIEIPS
LRQRRTDIPL LVQHFIEQLS AKFNLPQLPR IAPEQLNILN QYGWPGNVRE LINVLERAII
QHPAGPLDFS FLAPKSLEAV KTPSNQTVII DPSHASDKLV PLEVMTKKYI SHALRITGGK
LYGPGGAAEL LDINANTLRS KMKKLGIV
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