Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1484 |
Symbol | |
ID | 4478121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1727544 |
End bp | 1729028 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639726054 |
Product | amino acid carrier protein |
Protein accession | YP_869124 |
Protein GI | 117919932 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAGA TTGTTAATGC GGTCAACAAT ATCGTTTGGA GCCCCGCACT CGTTTATCTT TGCCTCGGTG TAGGACTCTT TTTCTCCCTG CGCTCACGTT TCCTACAGTT ACGCCATTTA CCCGAAATGA TCCGTTTAAT GTTTGATGGT AAGAGCACTG ATGCTGGTGT GTCTTCCTTC CAAGCCTTAG CCATGACTTT AGCAGGTCGT GTGGGAACCG GAAACATTGC CGGTGTCGCC ACGGCGATTA CCTTCGGCGG TCCGGGGGCA TTGTTTTGGA TGTGGATGGT AGCGTTTCTT GGCGCCAGCT CCGCATTCGT CGAATCCACC TTAGGCCAAG TCTACAAAGA AAAAATCAAT GGAGAGTATC GCGGCGGCCC CGCCTTTTAC ATTGAAAAAG GCTTAGGCAT GAAGTGGTAC GCTTGGACAT TTGCCATTGC GACCATTTTT GCCTGCGGAA TTTTACTGCC TGGCGTGCAA GCCAACTCGA TTGGTTCGAG CCTAAAAACC GCCTTCGATA TCGACCCTAA CGTCACCGCC GCTATCCTCG CTATGCTGTT AGGGTTCATT ATCTTTGGTG GCGTAAAACG TATTGCCCAC TTTGCCAGTA CCGTAGTGCC CTTTATGGCA CTGGGTTATA TCATTGTCGC CTGCGTGATT ATTGCCCTTA ACATTGGTCA GCTGCCCGAT ATTATTATGT TGATCCTAAA AAGTGCCTTC GGACTCGATG CGGGCTTTGG TGCGATTTTG GGTCTTGCGA TTATGTGGGG GGTAAAACGT GGTATTTACT CAAACGAAGC GGGCCAAGGT ACTGGGCCGC ACGCTTCTTC TGCCGCCGCC GTGAGCCACC CTGCCAAACA AGGTTTAGTG CAAGCCTTCT CAGTGTATGT CGATACCCTA TTTGTCTGTT CAGCTACCGG CTTTATGCTA CTGATCACGG GTTTGTATAA TGTGCAGGGC CCAGATGGCG CCGCGCTGTA TACTGGGATT GCGGGCGTCG CAGCAGGCCC AGGTTATGTG CAAACCGCAA TGGAAAGCAT GATGCCAGGC TTTGGTAATA TGTTCGTTGC CGTCGCGCTG TTCTTCTTCG CCTTCACCAC CATTGTGGCC TACTACTATA TCGCCGAAAC CAACATAGCC TATATCAATC GCAAGGCGAA TCGTCCTTGG CTCACAGTGG TGCTGAAAGT GGTGCTGATG GCATCAACTG TTTATGGCAC AGTGAAAACC GCCGATTTGG CCTGGGGCAT GGGTGACATT GGTGTGGGAC TGATGGCATG GCTAAACATC ATCGCCATTA TTCTGCTGCA ACGCATCGCC TTTACTTGCC TGAAGGATTA TGAGTCGCAA CAGAAACAAG GGGTTGAGCC GTTGTTCGAT CCTGAAAAAC TCGGTATTCC CCACGCAGAC TATTGGGTTG AACGCAAAAA TGCGCAGGAT GAACTAGCGC AGAGTCAATC CAGCGAGACT CCTAAAATCT CCTAA
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Protein sequence | MNEIVNAVNN IVWSPALVYL CLGVGLFFSL RSRFLQLRHL PEMIRLMFDG KSTDAGVSSF QALAMTLAGR VGTGNIAGVA TAITFGGPGA LFWMWMVAFL GASSAFVEST LGQVYKEKIN GEYRGGPAFY IEKGLGMKWY AWTFAIATIF ACGILLPGVQ ANSIGSSLKT AFDIDPNVTA AILAMLLGFI IFGGVKRIAH FASTVVPFMA LGYIIVACVI IALNIGQLPD IIMLILKSAF GLDAGFGAIL GLAIMWGVKR GIYSNEAGQG TGPHASSAAA VSHPAKQGLV QAFSVYVDTL FVCSATGFML LITGLYNVQG PDGAALYTGI AGVAAGPGYV QTAMESMMPG FGNMFVAVAL FFFAFTTIVA YYYIAETNIA YINRKANRPW LTVVLKVVLM ASTVYGTVKT ADLAWGMGDI GVGLMAWLNI IAIILLQRIA FTCLKDYESQ QKQGVEPLFD PEKLGIPHAD YWVERKNAQD ELAQSQSSET PKIS
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