Gene Shewana3_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1484 
Symbol 
ID4478121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1727544 
End bp1729028 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content51% 
IMG OID639726054 
Productamino acid carrier protein 
Protein accessionYP_869124 
Protein GI117919932 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1115] Na+/alanine symporter 
TIGRFAM ID[TIGR00835] amino acid carrier protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGA TTGTTAATGC GGTCAACAAT ATCGTTTGGA GCCCCGCACT CGTTTATCTT 
TGCCTCGGTG TAGGACTCTT TTTCTCCCTG CGCTCACGTT TCCTACAGTT ACGCCATTTA
CCCGAAATGA TCCGTTTAAT GTTTGATGGT AAGAGCACTG ATGCTGGTGT GTCTTCCTTC
CAAGCCTTAG CCATGACTTT AGCAGGTCGT GTGGGAACCG GAAACATTGC CGGTGTCGCC
ACGGCGATTA CCTTCGGCGG TCCGGGGGCA TTGTTTTGGA TGTGGATGGT AGCGTTTCTT
GGCGCCAGCT CCGCATTCGT CGAATCCACC TTAGGCCAAG TCTACAAAGA AAAAATCAAT
GGAGAGTATC GCGGCGGCCC CGCCTTTTAC ATTGAAAAAG GCTTAGGCAT GAAGTGGTAC
GCTTGGACAT TTGCCATTGC GACCATTTTT GCCTGCGGAA TTTTACTGCC TGGCGTGCAA
GCCAACTCGA TTGGTTCGAG CCTAAAAACC GCCTTCGATA TCGACCCTAA CGTCACCGCC
GCTATCCTCG CTATGCTGTT AGGGTTCATT ATCTTTGGTG GCGTAAAACG TATTGCCCAC
TTTGCCAGTA CCGTAGTGCC CTTTATGGCA CTGGGTTATA TCATTGTCGC CTGCGTGATT
ATTGCCCTTA ACATTGGTCA GCTGCCCGAT ATTATTATGT TGATCCTAAA AAGTGCCTTC
GGACTCGATG CGGGCTTTGG TGCGATTTTG GGTCTTGCGA TTATGTGGGG GGTAAAACGT
GGTATTTACT CAAACGAAGC GGGCCAAGGT ACTGGGCCGC ACGCTTCTTC TGCCGCCGCC
GTGAGCCACC CTGCCAAACA AGGTTTAGTG CAAGCCTTCT CAGTGTATGT CGATACCCTA
TTTGTCTGTT CAGCTACCGG CTTTATGCTA CTGATCACGG GTTTGTATAA TGTGCAGGGC
CCAGATGGCG CCGCGCTGTA TACTGGGATT GCGGGCGTCG CAGCAGGCCC AGGTTATGTG
CAAACCGCAA TGGAAAGCAT GATGCCAGGC TTTGGTAATA TGTTCGTTGC CGTCGCGCTG
TTCTTCTTCG CCTTCACCAC CATTGTGGCC TACTACTATA TCGCCGAAAC CAACATAGCC
TATATCAATC GCAAGGCGAA TCGTCCTTGG CTCACAGTGG TGCTGAAAGT GGTGCTGATG
GCATCAACTG TTTATGGCAC AGTGAAAACC GCCGATTTGG CCTGGGGCAT GGGTGACATT
GGTGTGGGAC TGATGGCATG GCTAAACATC ATCGCCATTA TTCTGCTGCA ACGCATCGCC
TTTACTTGCC TGAAGGATTA TGAGTCGCAA CAGAAACAAG GGGTTGAGCC GTTGTTCGAT
CCTGAAAAAC TCGGTATTCC CCACGCAGAC TATTGGGTTG AACGCAAAAA TGCGCAGGAT
GAACTAGCGC AGAGTCAATC CAGCGAGACT CCTAAAATCT CCTAA
 
Protein sequence
MNEIVNAVNN IVWSPALVYL CLGVGLFFSL RSRFLQLRHL PEMIRLMFDG KSTDAGVSSF 
QALAMTLAGR VGTGNIAGVA TAITFGGPGA LFWMWMVAFL GASSAFVEST LGQVYKEKIN
GEYRGGPAFY IEKGLGMKWY AWTFAIATIF ACGILLPGVQ ANSIGSSLKT AFDIDPNVTA
AILAMLLGFI IFGGVKRIAH FASTVVPFMA LGYIIVACVI IALNIGQLPD IIMLILKSAF
GLDAGFGAIL GLAIMWGVKR GIYSNEAGQG TGPHASSAAA VSHPAKQGLV QAFSVYVDTL
FVCSATGFML LITGLYNVQG PDGAALYTGI AGVAAGPGYV QTAMESMMPG FGNMFVAVAL
FFFAFTTIVA YYYIAETNIA YINRKANRPW LTVVLKVVLM ASTVYGTVKT ADLAWGMGDI
GVGLMAWLNI IAIILLQRIA FTCLKDYESQ QKQGVEPLFD PEKLGIPHAD YWVERKNAQD
ELAQSQSSET PKIS