| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1479 |
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| Symbol | truA |
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| ID | 4478116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1722170 |
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| End bp | 1722955 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639726049 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_869119 |
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| Protein GI | 117919927 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0778674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.668888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGATTG CATTAGGTAT TGAATATGAC GGAAGTGGTT ATTTCGGTTG GCAGCGTCAG
GCCGAAGTCG ATTCAGTACA AGGGCAATTA GAACAAGCCT TATCTAAGGT GGCGAACGAA
CCCATCAGCT TGTTCTGTGC GGGGCGAACC GATGCCGGCG TTCATGCAAC GGGGCAGGTG
GTGCATTTCG AGACTAATGC CATACGTAAC GAAGGCGCGT GGACCTTAGG GGTGAATGCC
AATTTGCCCG ATAATATCGC CGTTCGCTGG GCAAAAGAGG TGGATGATAC TTTCCATGCC
CGCTTTTCCG CCACGGCCAG ACGTTATCGC TATGTGATTT ACAATCATAA TTTTCGCCCC
GGGATCCTAC GTCACGGCGT GAGCCATTAC CACGGTGATA TCGACACCGA TAAAATGCAT
GTTGCGGCGC AGGCGTTGCT GGGTGAGCAG GACTTTACCA GTTTTCGCGC TATTCAATGT
CAATCGAAAA CCCCGTTTCG CAATGTGCAC AGCGTTAAAG TGACGCGTCA GGGGATGTAT
GTGATTGTCG ATATTTCTGC TAACGCCTTC TTGCACCATA TGGTGCGTAA CATTGTGGGC
TCCCTGCTGG AAATCGGCCT AGGCAACCAA CCATTGACCT GGATGGCGGA TTTACTGGCC
CTTAAAGACA GAAATCAAGC GGCGGCCACC GCTAAACCCA ATGGGCTCTA TTTAGTCGAT
GTGACGTATC CCGAGCAGTA TCAACTGCCT AAGTTGGCTT TAGGGCCATT GTTTATGCTG
GATTAA
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| Protein sequence | MRIALGIEYD GSGYFGWQRQ AEVDSVQGQL EQALSKVANE PISLFCAGRT DAGVHATGQV
VHFETNAIRN EGAWTLGVNA NLPDNIAVRW AKEVDDTFHA RFSATARRYR YVIYNHNFRP
GILRHGVSHY HGDIDTDKMH VAAQALLGEQ DFTSFRAIQC QSKTPFRNVH SVKVTRQGMY
VIVDISANAF LHHMVRNIVG SLLEIGLGNQ PLTWMADLLA LKDRNQAAAT AKPNGLYLVD
VTYPEQYQLP KLALGPLFML D
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