Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1467 |
Symbol | |
ID | 4479684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1706153 |
End bp | 1706683 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639726037 |
Product | hypothetical protein |
Protein accession | YP_869107 |
Protein GI | 117919915 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0196925 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAA ACGATGATAA AGAAGGCATG GCGATGTTTT CGGCGCTGAT CGAGGGGATA AAACCTATCG CCCAAGATAA GCGGCATTTT CGCACGCCCC TAAAAACCAA ACAGGAAATT GAACTGAAAG AGCAGCAACT GCATGCTGAC AGTTATTTCT CAGATACTTA TCAACCTCTG CTGCCCGTTC AGGGGCCAAT GCGTTGGCTC GACGAGGGTG TCGATAGTCT CGAGCTTAAA CGCTTAAGAC GCGGCGATTA CCAACCGGAT TTATTGCTAG ACTTACACGG TTACCGCCAA TCTGAGGCTA AACTCGAGCT CGCGGCGCTC ATTCAAGCCT GCGTAAAACA GCAAAGCCAA TGTTGTTGTG TGATGCACGG TTACGGCACT GGCATACTTA AACAGCAGGT GCCTATGTGG TTGGTGCAAC ATCCTAAGGT AAAAGCCTTT CATCAGGCCC CAAAAGAATG GGGTGGCGAT GCGGCGCTGC TGGTGCTTAT CGATATTGGC GACCAACCAC ATCGACGTTA A
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Protein sequence | MNKNDDKEGM AMFSALIEGI KPIAQDKRHF RTPLKTKQEI ELKEQQLHAD SYFSDTYQPL LPVQGPMRWL DEGVDSLELK RLRRGDYQPD LLLDLHGYRQ SEAKLELAAL IQACVKQQSQ CCCVMHGYGT GILKQQVPMW LVQHPKVKAF HQAPKEWGGD AALLVLIDIG DQPHRR
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