Gene Shewana3_1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1467 
Symbol 
ID4479684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1706153 
End bp1706683 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content49% 
IMG OID639726037 
Producthypothetical protein 
Protein accessionYP_869107 
Protein GI117919915 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0196925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA ACGATGATAA AGAAGGCATG GCGATGTTTT CGGCGCTGAT CGAGGGGATA 
AAACCTATCG CCCAAGATAA GCGGCATTTT CGCACGCCCC TAAAAACCAA ACAGGAAATT
GAACTGAAAG AGCAGCAACT GCATGCTGAC AGTTATTTCT CAGATACTTA TCAACCTCTG
CTGCCCGTTC AGGGGCCAAT GCGTTGGCTC GACGAGGGTG TCGATAGTCT CGAGCTTAAA
CGCTTAAGAC GCGGCGATTA CCAACCGGAT TTATTGCTAG ACTTACACGG TTACCGCCAA
TCTGAGGCTA AACTCGAGCT CGCGGCGCTC ATTCAAGCCT GCGTAAAACA GCAAAGCCAA
TGTTGTTGTG TGATGCACGG TTACGGCACT GGCATACTTA AACAGCAGGT GCCTATGTGG
TTGGTGCAAC ATCCTAAGGT AAAAGCCTTT CATCAGGCCC CAAAAGAATG GGGTGGCGAT
GCGGCGCTGC TGGTGCTTAT CGATATTGGC GACCAACCAC ATCGACGTTA A
 
Protein sequence
MNKNDDKEGM AMFSALIEGI KPIAQDKRHF RTPLKTKQEI ELKEQQLHAD SYFSDTYQPL 
LPVQGPMRWL DEGVDSLELK RLRRGDYQPD LLLDLHGYRQ SEAKLELAAL IQACVKQQSQ
CCCVMHGYGT GILKQQVPMW LVQHPKVKAF HQAPKEWGGD AALLVLIDIG DQPHRR