| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1466 |
|---|
| Symbol | |
|---|
| ID | 4479683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 1705617 |
|---|
| End bp | 1706087 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639726036 |
|---|
| Product | phosphohistidine phosphatase, SixA |
|---|
| Protein accession | YP_869106 |
|---|
| Protein GI | 117919914 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2062] Phosphohistidine phosphatase SixA |
|---|
| TIGRFAM ID | [TIGR00249] phosphohistidine phosphatase SixA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00970455 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTAT TTTTGATGCG ACATGGTGAC GCTGGATTTA ATGCTCAGTC GGATAGGGAC
AGAACGCTTA CCGATTTAGG AAGACACCAT ACCGTCTTAA TGAGTAACTG GTTAGCCCGA
AGTGTCAGCG ATTTTGATCT TGTTTTGGTC AGCCCTTATT TACGTGCGCA GCAAACGTGG
CAAGAATTGA GTCAACATTT TCCCGAGCCT CGCAAATGGT TGGTCGTGGA TGATTTAGTG
CCTTCAGGTG ATCCCGCCAA TGTGGCCGCC TTAATTGTTG CCTATGCCGA GCTGTACAAG
GCCGATAAAG TGCTGGTGAT TTCCCATATG CCGCTCTTAG GCTATTTGGT CAGCGAGTTA
GTTGCAGGTG TTGAGCCGCC CCTATTTGCC ACCTCGGGGA TCACTCTGAT AGATAAACAT
GCCGAGCAGG CCTGCATTGT TTGGCAGCAT GCGCCCCACA GCATTAGTTA A
|
|---|
| Protein sequence | MQLFLMRHGD AGFNAQSDRD RTLTDLGRHH TVLMSNWLAR SVSDFDLVLV SPYLRAQQTW
QELSQHFPEP RKWLVVDDLV PSGDPANVAA LIVAYAELYK ADKVLVISHM PLLGYLVSEL
VAGVEPPLFA TSGITLIDKH AEQACIVWQH APHSIS
|
|---|
| |