| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1451 |
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| Symbol | |
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| ID | 4479668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1682588 |
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| End bp | 1684039 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639726021 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_869091 |
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| Protein GI | 117919899 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0423407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000084673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACGATTG AAACCCCGAT TTTAATCACA TTTGTTGGCT ATTTAGTATT GATGATGGGC
ATAGGATTTT GGGCTTACCG TGCCACCGAT ACTGTTGATG ATTATATTTT AGGTGGCCGT
AAAATGGGCC CCGCCGTAAC CGCGCTCAGC GTGGGCGCCT CCGATATGTC AGGCTGGTTA
CTCTTAGGTT TACCCGGCGC CGTTTACTTA GGCGGCTTAG GCGAAGCTTG GATTGGTATC
GGCTTAGTCG TCGGTGCTTG GCTTAACTGG TTGTTTGTGG CCAAACGTTT GCGCATTTAC
ACTCAATTAG CGGACAACGC CCTCACCCTG CCCGACTTCT TCGAGAAACG TTTTCACGAT
AAACAGGGCT ACCTCAAACT CGTCTCTGCG GTCACGATTC TGGTGTTTTT CACCTTCTAT
GCATCCTCTG GCATGGTGGG CGGCGCCATT CTGTTCGAAA AAGTCTTCGG ACTCGATTAC
ACCGTTGCCT TAGTCATTGG TTCGGCCATC ATCGTGGGTT ACACCTTTAT TGGCGGCTTT
TTTGCCGTGA GTTGGACCGA CTTCTTCCAA GGCTGCTTGA TGCTGATAGC CCTGCTGATC
ATCCCCTTTG CGGTGTTCTC GCACCCAGAG AGCCATGCGG GAATTGAGTC TATCGACCCG
GCTATGCTGG CACTTATCAG TGACAAAACC ACGGTAATTG GCTTGTTATC ACTGCTGGCG
TGGGGACTAG GTTATTTCGG CCAGCCACAT ATTTTGTCGC GCTTTATGGC CATTGGCACT
GCCGATGCAC TACCGCTGTC TCGCCGTATC GCCATGAGCT GGATGATGTT ATCCCTCATC
GGCGCTTTAG CCACAGGGTT AGCGGGTTCA CTGTATTTTG CCAATCAACC ACTCGCCAAT
GCCGAAACCG TGTTTATTCA TTTAGCCCAA GCCGCCTTTA ACCCTTGGAT TGGGGGCTTG
CTGATCGCCG CAATTCTATC GGCCATTATG AGTACCATTG ATTCGCAGTT ATTGGTGTGC
TCGAGCGTCA TCACCGAAGA CTTTTACCGC AAGTGGTTGC GCCCTCAAGC CGACGATCGC
GAGTTGATGA TGGTAGGTCG TATGGGCGTG CTGGCCATTG CCGTGATCGC AGGCATCATT
GCATTGAATC CTGAAAGCAG TGTATTAAGC CTTGTGAGCT ATGCGTGGGC AGGTTTTGGC
GCTGCCTTTG GCCCTGTGGT GCTCCTGTCA CTCTTCTGGA AGCAATACAG CCGTAACGGT
GCAATTGCTA CCATTATTGT CGGCGCATTA ACCGTGGTGA TATGGAAGCA GCTCACAGGT
GGCATTTTCG ACCTATACGA AATCTTACCT GGATTTGTGT TTGCAATTAT TGCAGGGGTT
GTTGTGAGCA AGATGTCTCG CCCAGCAGAA ACCATCACCG CAGAGTTTGA GCAATTTAAG
TCCGCGTTGT AA
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| Protein sequence | MTIETPILIT FVGYLVLMMG IGFWAYRATD TVDDYILGGR KMGPAVTALS VGASDMSGWL
LLGLPGAVYL GGLGEAWIGI GLVVGAWLNW LFVAKRLRIY TQLADNALTL PDFFEKRFHD
KQGYLKLVSA VTILVFFTFY ASSGMVGGAI LFEKVFGLDY TVALVIGSAI IVGYTFIGGF
FAVSWTDFFQ GCLMLIALLI IPFAVFSHPE SHAGIESIDP AMLALISDKT TVIGLLSLLA
WGLGYFGQPH ILSRFMAIGT ADALPLSRRI AMSWMMLSLI GALATGLAGS LYFANQPLAN
AETVFIHLAQ AAFNPWIGGL LIAAILSAIM STIDSQLLVC SSVITEDFYR KWLRPQADDR
ELMMVGRMGV LAIAVIAGII ALNPESSVLS LVSYAWAGFG AAFGPVVLLS LFWKQYSRNG
AIATIIVGAL TVVIWKQLTG GIFDLYEILP GFVFAIIAGV VVSKMSRPAE TITAEFEQFK
SAL
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