| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1442 |
|---|
| Symbol | |
|---|
| ID | 4479659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 1670844 |
|---|
| End bp | 1671389 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639726012 |
|---|
| Product | YaeQ family protein |
|---|
| Protein accession | YP_869082 |
|---|
| Protein GI | 117919890 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4681] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000463283 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000000191661 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTCA AAGCGACCGT GTTTAAGGTC AATCTTCAGA TCGCCGATAT GGACCGAGGT
TATTATCAAG ATCATCAGCT GACGTTAGCG CAGCATCCCT CCGAGACCGA TGGCCGCATG
ATGGTGCGTC TGCTGGCCTT TATCCTAAAC GCTTCCGAGA CTTTAAGTTT TACTAAGGGA
TTGTGCGTCG ACGATGAGCC TGAGCTGTGG GACAAGAGTC TCTCTGGTGA AGTGGACCTG
TGGATTGAGT TTGGCCAAGC CGATGAGAAA TGGCTGCGTA AGGCGAGCGG TCGCGCAAAA
GCGGTACAGT TGTTTACCTA CGGCGGACGC AGTGTTCCAA TTTGGTGGAA ACAGAATCAA
GCGGCCCTAG AGCGTTATAA AAACCTTAAA GTGTGGAATA TTGCCGAAGA GTCGGTGACG
GCGATGGAGG CCTTAGTGAG CCGCACTATG TCGCTGCAGG CGTCCATCAG TGAAGGGCAA
GTCTGGTTAT CGGATAATGA GCACAGTGTG CTTATCGAGC CCGAAATGCT GAAAGATGAC
CAATAA
|
|---|
| Protein sequence | MALKATVFKV NLQIADMDRG YYQDHQLTLA QHPSETDGRM MVRLLAFILN ASETLSFTKG
LCVDDEPELW DKSLSGEVDL WIEFGQADEK WLRKASGRAK AVQLFTYGGR SVPIWWKQNQ
AALERYKNLK VWNIAEESVT AMEALVSRTM SLQASISEGQ VWLSDNEHSV LIEPEMLKDD
Q
|
|---|
| |