Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1432 |
Symbol | |
ID | 4479649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1662021 |
End bp | 1662647 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639726002 |
Product | hypothetical protein |
Protein accession | YP_869072 |
Protein GI | 117919880 |
COG category | [S] Function unknown |
COG ID | [COG3124] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.205377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00400563 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACATTC TTACACACTT ACATCTGGCC GAGATCAGTA AAACCCACCT AGGCGCCAAT CTGGCAGGCA ATTTTATCAC CGCGCCAATC GATTCTGCGC CACAAGCACT TCGCCAAGGA CTGTGGTTAA ACCAAGAAAT CAATCAGCTC TGCGCCACCC ATGAACTGAC CCAAGAGCTA ATGGCCCTGT TCCCTGCCCA GTTAACAAGC ATAGCAGCAG ATTTGATGTT CGTAAGTTTC GATCATTATT TAGCCTACTA CTGGGAAGAA TATCATCACC TGCCGCTGCC CGAGTTTAGC CAAAAGGCCT ATCGCGAACT GGCAGAATTT GCGACGCAAA GCGATGAGTA TCACCCTCAG CCCTGTCTGA ACCTCATCGC CGATATGCGC AGTCAAGATT GGTTAAACGC TTACGCCACA CCTAAAGGCA TTCAACAGGC CTTAGCACAA CGGGCCAAAG GTCATCCGCA CTGTGCCTTA TTTAACGGCG CGGATAAACT GCTAGCGAAA ATGCAGATAG AGACAGAAAC CGCCTTTCGC ACCTTTTACC CTCAGTTGAT GGCCTACACC CGTATTTGGA GTCGTAAAAC CCCGAGTGAC TATCTACCTA ATGGTTCTGC CGACTAG
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Protein sequence | MNILTHLHLA EISKTHLGAN LAGNFITAPI DSAPQALRQG LWLNQEINQL CATHELTQEL MALFPAQLTS IAADLMFVSF DHYLAYYWEE YHHLPLPEFS QKAYRELAEF ATQSDEYHPQ PCLNLIADMR SQDWLNAYAT PKGIQQALAQ RAKGHPHCAL FNGADKLLAK MQIETETAFR TFYPQLMAYT RIWSRKTPSD YLPNGSAD
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