Gene Shewana3_1432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1432 
Symbol 
ID4479649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1662021 
End bp1662647 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content49% 
IMG OID639726002 
Producthypothetical protein 
Protein accessionYP_869072 
Protein GI117919880 
COG category[S] Function unknown 
COG ID[COG3124] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.205377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00400563 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACATTC TTACACACTT ACATCTGGCC GAGATCAGTA AAACCCACCT AGGCGCCAAT 
CTGGCAGGCA ATTTTATCAC CGCGCCAATC GATTCTGCGC CACAAGCACT TCGCCAAGGA
CTGTGGTTAA ACCAAGAAAT CAATCAGCTC TGCGCCACCC ATGAACTGAC CCAAGAGCTA
ATGGCCCTGT TCCCTGCCCA GTTAACAAGC ATAGCAGCAG ATTTGATGTT CGTAAGTTTC
GATCATTATT TAGCCTACTA CTGGGAAGAA TATCATCACC TGCCGCTGCC CGAGTTTAGC
CAAAAGGCCT ATCGCGAACT GGCAGAATTT GCGACGCAAA GCGATGAGTA TCACCCTCAG
CCCTGTCTGA ACCTCATCGC CGATATGCGC AGTCAAGATT GGTTAAACGC TTACGCCACA
CCTAAAGGCA TTCAACAGGC CTTAGCACAA CGGGCCAAAG GTCATCCGCA CTGTGCCTTA
TTTAACGGCG CGGATAAACT GCTAGCGAAA ATGCAGATAG AGACAGAAAC CGCCTTTCGC
ACCTTTTACC CTCAGTTGAT GGCCTACACC CGTATTTGGA GTCGTAAAAC CCCGAGTGAC
TATCTACCTA ATGGTTCTGC CGACTAG
 
Protein sequence
MNILTHLHLA EISKTHLGAN LAGNFITAPI DSAPQALRQG LWLNQEINQL CATHELTQEL 
MALFPAQLTS IAADLMFVSF DHYLAYYWEE YHHLPLPEFS QKAYRELAEF ATQSDEYHPQ
PCLNLIADMR SQDWLNAYAT PKGIQQALAQ RAKGHPHCAL FNGADKLLAK MQIETETAFR
TFYPQLMAYT RIWSRKTPSD YLPNGSAD