Gene Shewana3_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1426 
Symbol 
ID4479643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1656394 
End bp1657620 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content49% 
IMG OID639725996 
Productserine/threonine transporter SstT 
Protein accessionYP_869066 
Protein GI117919874 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3633] Na+/serine symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.090944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAG AATCGTCTTT GTTAGCCAAG TTGGCTAATG GCAGTTTGGT GCTGCAAATT 
CTCGTGGGGA TCATCGCTGG TGTGAGTCTA GCCAGTTTTT CACATGAAGC CGCAAAGCAA
GTCGCGTTTT TAGGAAGTCT CTTCGTAGGT GCATTAAAAG CCATTGCACC TATTCTGGTG
TTTATCCTAG TGGCGTCTTC CATCGCCAAT CAAAAGAAAA ATACTCAAAC CAATATGCGT
CCGATAGTGG TGCTGTACTT ATTTGGCACC TTCGCTGCTG CGTTAACCGC CGTGGTGTTA
AGTATGATGT TCCCAACCAA TTTAGTGTTG GTCGCTGGCG TTGAGGGCAC CAGCCCGCCG
CAGGGCATTG GCGAAGTGAT CAATACCTTA CTCTTTAAAC TGGTTGATAA CCCAGTCAAT
GCGTTAATGA CGGGCAACTA CATTGGCATT TTGGCTTGGG GTGTGGGTTT AGGTTTAGCC
CTGCACCATG CGAGCGACTC GACCAAGCAA GTGTTTGCCG ATGTGAGCCA CGGTATTTCG
CAAATGGTGC GTTTTATCAT TCGTTTAGCG CCTATCGGTA TTTTTGGTCT GGTGGCGGCA
ACCTTTGCCG AAACCGGTTT TGCCGCCATT GCCGGTTACG CCAAGCTATT GGCCGTGTTA
CTCGGCGCGA TGGCTATCAT AGCTTTGATT GTTAACCCGC TGATTGTTTA CGTGAAAATT
AAACGTAATC CCTATCCTTT AGTGATCCGT TGTCTGCGCG AAAGTGGCGT AACCGCATTT
TTCACCCGCT CGAGTGCGGC GAACATTCCG GTGAATATGG CGCTGTGTGA AAAGTTAAAG
CTGCATGAAG ATACCTATTC TGTCTCTATT CCTCTAGGTG CAACCATCAA CATGGGCGGC
GCGGCGATTA CCATCACCGT GCTGACCTTA GCCGCGGCGC ATACCTTAGG GATTCAGGTG
GATTTATTAA CGGCGTTACT GCTGAGTGTC GTGGCGGCAA TTTCGGCCTG TGGCGCATCG
GGTGTGGCCG GTGGTTCGTT ACTACTTATT CCACTGGCCT GTAGCCTGTT TGGTATTTCC
AATGATGTGG CCATGCAAGT GGTTGCCGTT GGCTTTATTA TCGGGGTTAT CCAAGATGCG
GCCGAAACCG CACTGAATAG CTCTACGGAT GTGATTTTTA CCGCCGCAGC TTGTGAAGCC
GCTGAAAACA AAGCTAAACT TGGATAA
 
Protein sequence
MKQESSLLAK LANGSLVLQI LVGIIAGVSL ASFSHEAAKQ VAFLGSLFVG ALKAIAPILV 
FILVASSIAN QKKNTQTNMR PIVVLYLFGT FAAALTAVVL SMMFPTNLVL VAGVEGTSPP
QGIGEVINTL LFKLVDNPVN ALMTGNYIGI LAWGVGLGLA LHHASDSTKQ VFADVSHGIS
QMVRFIIRLA PIGIFGLVAA TFAETGFAAI AGYAKLLAVL LGAMAIIALI VNPLIVYVKI
KRNPYPLVIR CLRESGVTAF FTRSSAANIP VNMALCEKLK LHEDTYSVSI PLGATINMGG
AAITITVLTL AAAHTLGIQV DLLTALLLSV VAAISACGAS GVAGGSLLLI PLACSLFGIS
NDVAMQVVAV GFIIGVIQDA AETALNSSTD VIFTAAACEA AENKAKLG