Gene Shewana3_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1425 
Symbol 
ID4479642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1655322 
End bp1656221 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content51% 
IMG OID639725995 
Productresponse regulator receiver modulated CheW protein 
Protein accessionYP_869065 
Protein GI117919873 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.419487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0812955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA AGGCAAGTCA GTCCCAAGGG CTATTACTGT TTCGGTTGTC GCAAACACAG 
GTCTTTGCTC TGGGCACGCT TAAAATCCGT GAGTTAGTGC CTTACACTCC GCTAAGTAAA
ATTCCTCAAT CTCATCCGAC TATCATGGGA GCCGCAACGA TTCGCGGCCA TACCATTCCT
GTGGTAGATA TGGCGGCAGC GATTGGTTAT CGCCCCATCA GCGATGAAGA GCGCCAACAT
TGCTATATCA TCATTACCGA TTGTCAGCGG ATGATTATCG GCTTTTTGGT GCGTGCGATT
GATAAGATCA TCGAGTGCAA TTGGCGCGAT ATTGAAGCGC CATCGGCTAA TTTAGGCCGT
AATGCCTTTT TAACCGGAGT GACACGTTAC GATAATCAGC TGGTGCAGTT ACTCGACGTT
GAGTTGTTGC TGTCGAAGGT CTTCCCCGAT GCGCCCGAGG CCAATCGCGC CATTTTAACT
GACGTGCAGC GCGAGAAGTT AAAACCCATG CGTATTTTGC TGGTGGATGA TTCTAAGGTC
GCGCGCAAAC AACTTTCCGA TGCGCTCGAT AGCATTAACA TTCCCTATTT TGTGACCCCA
GACGGTAAAG AGGCGCTCTC GATTATGGAA CAGGCCGCCG CCGAGCATCA TCCTATCGAT
ATTCTGGTCA GCGATATTGA AATGCCTGGA CTCGATGGTT ATGAGCTGGC GTTTGAAGTG
CGTGACAATC CTCTTCTCGC CAAAGCTTAT ATCATTCTGC ATACCTCACT TTCGAGCGAG
ATCAGCGTCA GCCAAGCCCA CCAAGTTGGC GCAAATGAGG CGCTGACAAA GTTTGATGCC
CATGAGCTGG TGGAAGCCAT GCTGCGGGGC GCCGATTTAG CGGCTACGCG GGCGAATTAG
 
Protein sequence
MKSKASQSQG LLLFRLSQTQ VFALGTLKIR ELVPYTPLSK IPQSHPTIMG AATIRGHTIP 
VVDMAAAIGY RPISDEERQH CYIIITDCQR MIIGFLVRAI DKIIECNWRD IEAPSANLGR
NAFLTGVTRY DNQLVQLLDV ELLLSKVFPD APEANRAILT DVQREKLKPM RILLVDDSKV
ARKQLSDALD SINIPYFVTP DGKEALSIME QAAAEHHPID ILVSDIEMPG LDGYELAFEV
RDNPLLAKAY IILHTSLSSE ISVSQAHQVG ANEALTKFDA HELVEAMLRG ADLAATRAN