Gene Shewana3_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1422 
Symbol 
ID4479639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1651742 
End bp1653025 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content50% 
IMG OID639725992 
Product4a-hydroxytetrahydrobiopterin dehydratase 
Protein accessionYP_869062 
Protein GI117919870 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.219008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAG CTTCTTCCTC CGTTGCCAGC TTTGCCGAAC TTGGCATTAT TGCGCCCCTG 
TGTAATCGAC TCTCTGAGCT GACCTATGCG GCGCCTACGC CCATACAAGC GGCGACTATT
CCGGCCGTGC TCAGTGGACG GGACGTATTA GCGGGGGCGA ATACGGGCTC AGGCAAAACG
GCCGCCTTTG CCGTGCCGTT ATTACAGCGC CTGTTTGAGG CGAAAACCGC GGAAAAATCG
GCAGGCCAAG TGCGTTGTTT GGTACTCGTG CCAACCCGCG AATTGGCGCA GCAAGTTGCC
GATAGCTTTT TATCCTATGC CTCTCACTTC AATGGCCAAC TTAAGATAGT TGCGGCGTTT
GGTGGCGTGT CTGTCAATCT GCAAATGCAA AGCTTACGCG CGGGAGCCGA TGTGTTGGTG
GCAACGCCTG GCCGTTTATT GGATTTATTA GCCAGCAATG CGCTTAAGTT AAATCGCGTC
TCGGCCTTAG TGTTGGATGA AGCAGACCGA ATGCTAAGCC TTGGGTTTAC TGATGAATTA
AATCAAGTGC TTGAGGCGCT GCCGTCCAAG AAACAAACCT TATTATATTC GGCGACATTC
CCTGAAGAAG TGCGTGCACT CACGGCCAAA TTACTCCATC AACCGCTTGA ATATCATCTG
CAAAGTGAGC AAGAAAGCAC CATTGAACAG CGCGTTATCA CAGTCAACCG TGAACAAAAA
ACGGCGCTGT TGGCACACTT GATAAAACAG CATCAGTGGT CGCAGGCGCT TATTTTTGTC
AGTGCTAAAA ACACCTGTAA TCACCTCGCA CAGAAGCTGT CTAAACGTGG GATCAGTGCC
GAAGTCTTCC ATGGCGATAA GGCGCAAGGT GCGCGAACTC GAGTACTCGA TGGTTTTAAA
AGTGGTGAAA TCAGTGTGTT GATTGCGACC GATATCGCAG CCCGCGGTAT TGATATTGAT
AAACTCCCAG TGGTGATTAA CTTCGATTTA CCAAGAAGTC CGGCCGATTA TATGCACCGT
ATTGGCCGTA GCGGCCGCGC GGGAGAGGCG GGTTTGGCGG TGACCTTGAT TTCACATGAG
GAATATCATC ACTTCGGCGT GATAGAAAAG AAAAACAAAA TCAAACTTGT ACGTGAACAA
ATCCCAGGAT TTGAAGCGAA TGCCGAGATG CCACTCGAAG TGTTAGCGCA GGAAAAACCG
CAGGCTAAAC CCGAAGGCAC CGGCAAGAAA AAGCGTAAAC AGTTACCCGC GGCGAACCTT
GAATTTTGGG GTAAAAAGTC TTAA
 
Protein sequence
MTQASSSVAS FAELGIIAPL CNRLSELTYA APTPIQAATI PAVLSGRDVL AGANTGSGKT 
AAFAVPLLQR LFEAKTAEKS AGQVRCLVLV PTRELAQQVA DSFLSYASHF NGQLKIVAAF
GGVSVNLQMQ SLRAGADVLV ATPGRLLDLL ASNALKLNRV SALVLDEADR MLSLGFTDEL
NQVLEALPSK KQTLLYSATF PEEVRALTAK LLHQPLEYHL QSEQESTIEQ RVITVNREQK
TALLAHLIKQ HQWSQALIFV SAKNTCNHLA QKLSKRGISA EVFHGDKAQG ARTRVLDGFK
SGEISVLIAT DIAARGIDID KLPVVINFDL PRSPADYMHR IGRSGRAGEA GLAVTLISHE
EYHHFGVIEK KNKIKLVREQ IPGFEANAEM PLEVLAQEKP QAKPEGTGKK KRKQLPAANL
EFWGKKS