| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1421 |
|---|
| Symbol | |
|---|
| ID | 4479638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 1651138 |
|---|
| End bp | 1651704 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639725991 |
|---|
| Product | methylated-DNA--protein-cysteine methyltransferase |
|---|
| Protein accession | YP_869061 |
|---|
| Protein GI | 117919869 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0350] Methylated DNA-protein cysteine methyltransferase |
|---|
| TIGRFAM ID | [TIGR00589] O-6-methylguanine DNA methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.386045 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCGA ATATATCCCA ACTGATTAGC GCGCCAACGG CTAAAGATTA TCAGCCGTGC
GTTGTCGATA CCTTAAATAC CCCTGTCGGC ATACTACAAC TCAATGCCAA TGCCTACGGA
TTGAGCCACT TAACGGTCGT TGGGTCGAGC CGAACGGAGA TCCCGCTAAA GGTTGCAACT
GATGATGAAC TCACGCGGGC TAAAAGCCAT ATTGAACAGG CAAAGGCCCA GCTTCAGGAA
TATTTTCGCG GTGAGCTAAC TGAGTTCCAC TTAAGCTTAG CGCCTAAGGG AACCGAATTT
CAGCAGCAGG TGTGGCAGGC GCTGGTACAG GTCGGTTATG GGCAAAGTTG CAGTTATGGC
GATATCGCCC AGCGTATCGA CAGACCCAAA GCCGTCAGGG CGGTGGGAGC CGCAAATGGT
GCCAATCCCA TCGCGATTAT TGTGCCCTGT CACCGTATCA TTGGTAAAAA TGGCCAATTA
ACTGGTTATG CCTATGGACT CACGATGAAA CAACAGCTGT TAATGCTGGA ATCGACAAGC
AAGGGGGCGG ATTTTACGTT AGAATAG
|
|---|
| Protein sequence | MSPNISQLIS APTAKDYQPC VVDTLNTPVG ILQLNANAYG LSHLTVVGSS RTEIPLKVAT
DDELTRAKSH IEQAKAQLQE YFRGELTEFH LSLAPKGTEF QQQVWQALVQ VGYGQSCSYG
DIAQRIDRPK AVRAVGAANG ANPIAIIVPC HRIIGKNGQL TGYAYGLTMK QQLLMLESTS
KGADFTLE
|
|---|
| |