Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1418 |
Symbol | gltX |
ID | 4479021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1643838 |
End bp | 1645247 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639725979 |
Product | glutamyl-tRNA synthetase |
Protein accession | YP_869058 |
Protein GI | 117919866 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000145575 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAACTA AGACGCGTTT TGCCCCCAGC CCAACAGGCT TTTTGCACGT GGGCGGTGCC CGTACAGCTC TTTATTCTTG GTTACAAGCT CGTGCCAATA ATGGTGAGTT TGTTTTACGT ATCGAAGATA CGGATATTGA ACGTTCAACT CAGGCTGCCT GTGATGCCAT TTTAGAGGGC ATGAACTGGT TAGGTCTGAC GTGGGACGAG GGCCCGTACT ATCAAACTAA GCGTTTTGAT CGTTATAACG AAATCATCGC GCAGATGTTA GAGCAGGGCA CAGCTTATAA ATGTTATTGC TCGCGTGAAC GTATCGATGC TTTAAGAGAA GCACAAGCGG CAAATGGCGA AGCCCAAAAA TACGATGGTT GCTGCCGTGA CTTGCCGGCG CGTGACACTG ATGAGCCTTT TGTTGTGCGT TTTAAAAACC CCATCGGCGG TTCAGTGGTA TTTGATGACC ATGTCCGTGG CCGTATCGAG TTTTCAAACG ATGCATTAGA TGATCTGATC ATTGCCCGTA CCGATGGCGT ACCGACTTAT AACTTCTGTG TGGTTGTTGA CGATTGGGAT ATGGGTATTA CCTGTGTGGT TCGCGGTGAA GACCATATCA ACAACACGCC ACGTCAAATC AACATCCTTA AAGCATTAGG CGCGCCTATT CCTGAATATG CCCACGTGTC GATGATTTTA GGGGATGACG GTGCCAAGTT GTCTAAGCGT CACGGTGCGG TAAGCGTAAT GCAATACCGT GATGATGGTT ACCTACCAGA AGCACTGCTT AACTACTTAG TTCGCTTAGG TTGGTCACAT GGCGATCAAG AAGTGTTCTC TTTAGAAGAA ATGAAGCAGC TCTTTAAGTT AGATGACATC AACAAAGCGC CTTCTGCTTT TAATACCGAA AAACTGGTTT GGTTAAACCA ACACTATATT AAGACGCTTG ATCCTGAATA TGTGGCTAGC CATTTACAGT GGCACATGGA CGATCAAAAG ATTGATACCT CAAATGGCCC TGCTTTATCT GCGGTAGTAA CAGCATTGGC TGAACGCGCT AAAACTTTAA AAGAGTTAGC CGCTTCTAGC CGCTACTTCT ATGAAGACTT CGCAGAGTTC GATGCTGAGC AAGCGAAAAA GCACTTACGT GGTGTCGCGC TTGAGCCATT ACAATTAGTG CAACAAAAAC TGGCTGCATT AACTGAGTGG ACTGTTGAAG CTATCCACCA AGCGATTGAA GCTACCGCGA CCGAATTAGA AGTCGGTATG GGTAAAGTGG GTATGCCATT ACGTGTCGCT GTGACAGGTG CAGGGCAGTC TCCTGGCTTA GATATCACCT TATTCTTAAT AGGAAAGGCG CGTTCTGAGC AAAGAATATC CAAAGCGATT GAATTTGTAG CAGATAGAAT AAATTCCTAA
|
Protein sequence | MTTKTRFAPS PTGFLHVGGA RTALYSWLQA RANNGEFVLR IEDTDIERST QAACDAILEG MNWLGLTWDE GPYYQTKRFD RYNEIIAQML EQGTAYKCYC SRERIDALRE AQAANGEAQK YDGCCRDLPA RDTDEPFVVR FKNPIGGSVV FDDHVRGRIE FSNDALDDLI IARTDGVPTY NFCVVVDDWD MGITCVVRGE DHINNTPRQI NILKALGAPI PEYAHVSMIL GDDGAKLSKR HGAVSVMQYR DDGYLPEALL NYLVRLGWSH GDQEVFSLEE MKQLFKLDDI NKAPSAFNTE KLVWLNQHYI KTLDPEYVAS HLQWHMDDQK IDTSNGPALS AVVTALAERA KTLKELAASS RYFYEDFAEF DAEQAKKHLR GVALEPLQLV QQKLAALTEW TVEAIHQAIE ATATELEVGM GKVGMPLRVA VTGAGQSPGL DITLFLIGKA RSEQRISKAI EFVADRINS
|
| |