Gene Shewana3_1418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1418 
SymbolgltX 
ID4479021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1643838 
End bp1645247 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content46% 
IMG OID639725979 
Productglutamyl-tRNA synthetase 
Protein accessionYP_869058 
Protein GI117919866 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000145575 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTA AGACGCGTTT TGCCCCCAGC CCAACAGGCT TTTTGCACGT GGGCGGTGCC 
CGTACAGCTC TTTATTCTTG GTTACAAGCT CGTGCCAATA ATGGTGAGTT TGTTTTACGT
ATCGAAGATA CGGATATTGA ACGTTCAACT CAGGCTGCCT GTGATGCCAT TTTAGAGGGC
ATGAACTGGT TAGGTCTGAC GTGGGACGAG GGCCCGTACT ATCAAACTAA GCGTTTTGAT
CGTTATAACG AAATCATCGC GCAGATGTTA GAGCAGGGCA CAGCTTATAA ATGTTATTGC
TCGCGTGAAC GTATCGATGC TTTAAGAGAA GCACAAGCGG CAAATGGCGA AGCCCAAAAA
TACGATGGTT GCTGCCGTGA CTTGCCGGCG CGTGACACTG ATGAGCCTTT TGTTGTGCGT
TTTAAAAACC CCATCGGCGG TTCAGTGGTA TTTGATGACC ATGTCCGTGG CCGTATCGAG
TTTTCAAACG ATGCATTAGA TGATCTGATC ATTGCCCGTA CCGATGGCGT ACCGACTTAT
AACTTCTGTG TGGTTGTTGA CGATTGGGAT ATGGGTATTA CCTGTGTGGT TCGCGGTGAA
GACCATATCA ACAACACGCC ACGTCAAATC AACATCCTTA AAGCATTAGG CGCGCCTATT
CCTGAATATG CCCACGTGTC GATGATTTTA GGGGATGACG GTGCCAAGTT GTCTAAGCGT
CACGGTGCGG TAAGCGTAAT GCAATACCGT GATGATGGTT ACCTACCAGA AGCACTGCTT
AACTACTTAG TTCGCTTAGG TTGGTCACAT GGCGATCAAG AAGTGTTCTC TTTAGAAGAA
ATGAAGCAGC TCTTTAAGTT AGATGACATC AACAAAGCGC CTTCTGCTTT TAATACCGAA
AAACTGGTTT GGTTAAACCA ACACTATATT AAGACGCTTG ATCCTGAATA TGTGGCTAGC
CATTTACAGT GGCACATGGA CGATCAAAAG ATTGATACCT CAAATGGCCC TGCTTTATCT
GCGGTAGTAA CAGCATTGGC TGAACGCGCT AAAACTTTAA AAGAGTTAGC CGCTTCTAGC
CGCTACTTCT ATGAAGACTT CGCAGAGTTC GATGCTGAGC AAGCGAAAAA GCACTTACGT
GGTGTCGCGC TTGAGCCATT ACAATTAGTG CAACAAAAAC TGGCTGCATT AACTGAGTGG
ACTGTTGAAG CTATCCACCA AGCGATTGAA GCTACCGCGA CCGAATTAGA AGTCGGTATG
GGTAAAGTGG GTATGCCATT ACGTGTCGCT GTGACAGGTG CAGGGCAGTC TCCTGGCTTA
GATATCACCT TATTCTTAAT AGGAAAGGCG CGTTCTGAGC AAAGAATATC CAAAGCGATT
GAATTTGTAG CAGATAGAAT AAATTCCTAA
 
Protein sequence
MTTKTRFAPS PTGFLHVGGA RTALYSWLQA RANNGEFVLR IEDTDIERST QAACDAILEG 
MNWLGLTWDE GPYYQTKRFD RYNEIIAQML EQGTAYKCYC SRERIDALRE AQAANGEAQK
YDGCCRDLPA RDTDEPFVVR FKNPIGGSVV FDDHVRGRIE FSNDALDDLI IARTDGVPTY
NFCVVVDDWD MGITCVVRGE DHINNTPRQI NILKALGAPI PEYAHVSMIL GDDGAKLSKR
HGAVSVMQYR DDGYLPEALL NYLVRLGWSH GDQEVFSLEE MKQLFKLDDI NKAPSAFNTE
KLVWLNQHYI KTLDPEYVAS HLQWHMDDQK IDTSNGPALS AVVTALAERA KTLKELAASS
RYFYEDFAEF DAEQAKKHLR GVALEPLQLV QQKLAALTEW TVEAIHQAIE ATATELEVGM
GKVGMPLRVA VTGAGQSPGL DITLFLIGKA RSEQRISKAI EFVADRINS