| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1415 |
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| Symbol | |
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| ID | 4479012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1640125 |
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| End bp | 1640769 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639725970 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_869055 |
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| Protein GI | 117919863 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.622021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATATCGC GAATTTTTGG TTACTTTGAA GAAGGGGTGC TCAACCTCTT AATCACCTTA
ATGACACTCT TAGTGTTCAC AGAGGTAGTG GCGCGGTTTT TCTTCAATAC CGGTTTTTTA
TGGATCCAAG AACTGACCTT AACCCTTTGT GGTTGGTTTG TGCTTTTTGG TATGTCCTAT
GGGGTGAAAG TCGGTGCTCA CATCGGTGTT GATGCGTTTG TAAAAAATCT GCCCCCTAAG
GCTAAAAAGA TCACTTCCCT AGTGACGGCA TTGATTTGCT TAGCTTATTG CGGACTATTT
TTAAAAGGTA GCTGGGAATA TCTGTCACAG ATGTACCAAA TCGGCGTACC GATGGAAGAT
ATTCACTTTC CTAAGTTCCT GTTAAACAGC TTAGATCCCG ACTTTGCTTG GAACACCTTA
AAGATTGATG TCGAAGACGG CGCTGTGCCC ATTTGGTTAT CCCAAAGCAT TCTATTAATT
GGTTTTAGCA TGTTGACTTG GCGTTTCTTA GAACTGTTTA TCGCCATCCT ACGCAACCAA
GTTTCTGGAT TCCAATTTGC CGATGAAGCG AAAGAAAGCA TGCATTTAAT TGACGAAGCT
GCTCAGCACG CACAACAAGA AACAGACAAT AAGGAAGCGA AGTAA
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| Protein sequence | MISRIFGYFE EGVLNLLITL MTLLVFTEVV ARFFFNTGFL WIQELTLTLC GWFVLFGMSY
GVKVGAHIGV DAFVKNLPPK AKKITSLVTA LICLAYCGLF LKGSWEYLSQ MYQIGVPMED
IHFPKFLLNS LDPDFAWNTL KIDVEDGAVP IWLSQSILLI GFSMLTWRFL ELFIAILRNQ
VSGFQFADEA KESMHLIDEA AQHAQQETDN KEAK
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