Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1409 |
Symbol | |
ID | 4479006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1628749 |
End bp | 1630839 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639725964 |
Product | hypothetical protein |
Protein accession | YP_869049 |
Protein GI | 117919857 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01905] doubled CXXCH domain [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATAT TCACATCTAA AAAACTGGCA TACCTAGTCG CAATCGCCCT AACTGGCGCT CTAGCAGGCT GTGGCAGTGA TGGTAAAGAC GGCGCACCAG GCCAACCCGG CGATCCAGGT CAACCCGGTA AGCCTGGAGA CCCATGGACG CCACCACCAG TTACAAGTTC AGCGGTGACC AATGTTAAAG TACTGGGCTA CAGCTTTGGC GAAGGCAGTA TCACCTATGA ATTTGAAGTC ACCGACGAAA ACGGCAACTT AGTCAATGGC CTGTTAAATG CAGAAGCTAA AGTCGCCGCC TTAACCGACA AAGGCTTTAT CAATAACCGC GACGAAGCCG ACATTAACAA TGTCACCGAC AACGTGCATA TCGGCGGCGC TGCAACTCAA GCCACTGAAG GCGCTGAAAT CAAGTCGCTA GGCGATGGTC ATTACAGCTT TAAAGCTCCA ATGAAAGGTG TCAACGCCAG TACTGAAGGC ATCGTCTGGC TCAGAGTCGG CGGTAACAGC GAAAGCGGTA TTGCGCGCTC TGCGCCAATG GTTGTGAATA AGCCTGAAGG CACGCATTCA ACCACCACCG ACAGTTGCTA TGCTTGTCAC GTCGATTACG CCACTAGCCC ACGTCGCCAT GCTAGCTATG TCGCTACAGG TATGGACAGC GAAGTCACTT TCGTTGAAGG CTGTTTGGTC TGTCACGGCT CGGTGAGCCG CGGCGCGAAA AATGCCGAAG GCTTCTCTAT CGGCGGTTAC GCCACCAATA CACTGTCTAA AATTGGCCAC ATTAATCACC AGAAATTCAC TAAAGATTTC AGCGTGATGA ACTGTACTTC TTGCCACGTT GAAGCGCCAA CCAATATCAG CGTTTCAGGC CCTGGTTGTA TCGACTGCCA CAACACTGGC GGCGTACCAG GTGCGATTGT GCCAAGTAAC GGTGCCGATG TGCGCCCAAT GCATGAAGGC AAAGAAGGCA TTACCGAGCG TCAAGCTATC CGTGCTAAGT ACCAAGTAAC ACTCTCAACC CCCGTTAAAG TAGATGATAT TTCCACCTTA ACCGACCACT ATGCGCCCGA TGGCTCAAGC GTAGCGAAAG CGGAACCCGG TTGGTGTACC ACCATCACAG TGAAAGACAC TGACGGCAAC ATCTTTAGCA TTAAAGATAA CTTCAACTAC TCAGATCCTC TGGTATTTGA TGCCAAGAAG CCGATTGTCT ACGCTGGTGC CTATCTGCAT GCTTATGACA ACAACACCTT AGTAGGCCGC CCAGGTAACC GTACAAACTA TTACTATGGT TACAACACCG ATGGTACTAA GAATATCTGT CACCTACTGA CGGATATCAG CGCAGTGAAT GCTAACTATG CTTACTCTGC ACGGGTCACC TTCAGCACCG CAGGCTGGAT GGAATACGAC GGTAATCAAC GCTATCAAAG CAATGGTAAC CTCAGAGCCA AGGGCTATGA CGGTTCAATG GGTGTTTCTT TCACCGCCTA CTCAGATGTA GTTAATCCAG TAAGTGCTGA GAAAGTATCT GGTTTTGAAC GTCGCACTGT GATCAGCGAT AACAGCTGTA CGACTTGCCA CAACGATGCC ACCGCTTTCC ACAAAAACGG TGCATTCGAC CAAGGCGGTA ACGGCTGTAT TGCCTGCCAC GATAACGGCA TGGCTCGGAC TTCGGCCACA CTGGGTGCAG GTTTTGGTCC TATGATCCAC AGCTGGCACT GGGGTAATGG TGCAAATGTT GGTGAGATGA AGGCCGACGG CACCCAAGCC AAGACAGCGA ACGGCGCAGG CGCTATCAAC CCAGTCACTA GCTGTGTTGC CTGTCACGAA ACCGCTATTG ATTTAAACAA AGTGCCAAAT CAATACATTC TTGAACCCGG CAGCAAGATG ACCAGCCCTG TTACCGCTAA CTGTTATGCC TGCCATACTG GCGATGCAGT TAAAGCCCAC ATGGTGAGCA ACGGTGGCGA GATCAGCGTG CCAGCCACTG GCGATTGGTT CAAGCAACCT ACGGGTGAAT CTTGTGCCGT GTGCCACAAC ACAGGTAGCA GCTCTGGTAT CGACAAGTAC CATAACTTTA CCCGTAAATA A
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Protein sequence | MRIFTSKKLA YLVAIALTGA LAGCGSDGKD GAPGQPGDPG QPGKPGDPWT PPPVTSSAVT NVKVLGYSFG EGSITYEFEV TDENGNLVNG LLNAEAKVAA LTDKGFINNR DEADINNVTD NVHIGGAATQ ATEGAEIKSL GDGHYSFKAP MKGVNASTEG IVWLRVGGNS ESGIARSAPM VVNKPEGTHS TTTDSCYACH VDYATSPRRH ASYVATGMDS EVTFVEGCLV CHGSVSRGAK NAEGFSIGGY ATNTLSKIGH INHQKFTKDF SVMNCTSCHV EAPTNISVSG PGCIDCHNTG GVPGAIVPSN GADVRPMHEG KEGITERQAI RAKYQVTLST PVKVDDISTL TDHYAPDGSS VAKAEPGWCT TITVKDTDGN IFSIKDNFNY SDPLVFDAKK PIVYAGAYLH AYDNNTLVGR PGNRTNYYYG YNTDGTKNIC HLLTDISAVN ANYAYSARVT FSTAGWMEYD GNQRYQSNGN LRAKGYDGSM GVSFTAYSDV VNPVSAEKVS GFERRTVISD NSCTTCHNDA TAFHKNGAFD QGGNGCIACH DNGMARTSAT LGAGFGPMIH SWHWGNGANV GEMKADGTQA KTANGAGAIN PVTSCVACHE TAIDLNKVPN QYILEPGSKM TSPVTANCYA CHTGDAVKAH MVSNGGEISV PATGDWFKQP TGESCAVCHN TGSSSGIDKY HNFTRK
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