Gene Shewana3_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1409 
Symbol 
ID4479006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1628749 
End bp1630839 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content51% 
IMG OID639725964 
Producthypothetical protein 
Protein accessionYP_869049 
Protein GI117919857 
COG category 
COG ID 
TIGRFAM ID[TIGR01905] doubled CXXCH domain
[TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAT TCACATCTAA AAAACTGGCA TACCTAGTCG CAATCGCCCT AACTGGCGCT 
CTAGCAGGCT GTGGCAGTGA TGGTAAAGAC GGCGCACCAG GCCAACCCGG CGATCCAGGT
CAACCCGGTA AGCCTGGAGA CCCATGGACG CCACCACCAG TTACAAGTTC AGCGGTGACC
AATGTTAAAG TACTGGGCTA CAGCTTTGGC GAAGGCAGTA TCACCTATGA ATTTGAAGTC
ACCGACGAAA ACGGCAACTT AGTCAATGGC CTGTTAAATG CAGAAGCTAA AGTCGCCGCC
TTAACCGACA AAGGCTTTAT CAATAACCGC GACGAAGCCG ACATTAACAA TGTCACCGAC
AACGTGCATA TCGGCGGCGC TGCAACTCAA GCCACTGAAG GCGCTGAAAT CAAGTCGCTA
GGCGATGGTC ATTACAGCTT TAAAGCTCCA ATGAAAGGTG TCAACGCCAG TACTGAAGGC
ATCGTCTGGC TCAGAGTCGG CGGTAACAGC GAAAGCGGTA TTGCGCGCTC TGCGCCAATG
GTTGTGAATA AGCCTGAAGG CACGCATTCA ACCACCACCG ACAGTTGCTA TGCTTGTCAC
GTCGATTACG CCACTAGCCC ACGTCGCCAT GCTAGCTATG TCGCTACAGG TATGGACAGC
GAAGTCACTT TCGTTGAAGG CTGTTTGGTC TGTCACGGCT CGGTGAGCCG CGGCGCGAAA
AATGCCGAAG GCTTCTCTAT CGGCGGTTAC GCCACCAATA CACTGTCTAA AATTGGCCAC
ATTAATCACC AGAAATTCAC TAAAGATTTC AGCGTGATGA ACTGTACTTC TTGCCACGTT
GAAGCGCCAA CCAATATCAG CGTTTCAGGC CCTGGTTGTA TCGACTGCCA CAACACTGGC
GGCGTACCAG GTGCGATTGT GCCAAGTAAC GGTGCCGATG TGCGCCCAAT GCATGAAGGC
AAAGAAGGCA TTACCGAGCG TCAAGCTATC CGTGCTAAGT ACCAAGTAAC ACTCTCAACC
CCCGTTAAAG TAGATGATAT TTCCACCTTA ACCGACCACT ATGCGCCCGA TGGCTCAAGC
GTAGCGAAAG CGGAACCCGG TTGGTGTACC ACCATCACAG TGAAAGACAC TGACGGCAAC
ATCTTTAGCA TTAAAGATAA CTTCAACTAC TCAGATCCTC TGGTATTTGA TGCCAAGAAG
CCGATTGTCT ACGCTGGTGC CTATCTGCAT GCTTATGACA ACAACACCTT AGTAGGCCGC
CCAGGTAACC GTACAAACTA TTACTATGGT TACAACACCG ATGGTACTAA GAATATCTGT
CACCTACTGA CGGATATCAG CGCAGTGAAT GCTAACTATG CTTACTCTGC ACGGGTCACC
TTCAGCACCG CAGGCTGGAT GGAATACGAC GGTAATCAAC GCTATCAAAG CAATGGTAAC
CTCAGAGCCA AGGGCTATGA CGGTTCAATG GGTGTTTCTT TCACCGCCTA CTCAGATGTA
GTTAATCCAG TAAGTGCTGA GAAAGTATCT GGTTTTGAAC GTCGCACTGT GATCAGCGAT
AACAGCTGTA CGACTTGCCA CAACGATGCC ACCGCTTTCC ACAAAAACGG TGCATTCGAC
CAAGGCGGTA ACGGCTGTAT TGCCTGCCAC GATAACGGCA TGGCTCGGAC TTCGGCCACA
CTGGGTGCAG GTTTTGGTCC TATGATCCAC AGCTGGCACT GGGGTAATGG TGCAAATGTT
GGTGAGATGA AGGCCGACGG CACCCAAGCC AAGACAGCGA ACGGCGCAGG CGCTATCAAC
CCAGTCACTA GCTGTGTTGC CTGTCACGAA ACCGCTATTG ATTTAAACAA AGTGCCAAAT
CAATACATTC TTGAACCCGG CAGCAAGATG ACCAGCCCTG TTACCGCTAA CTGTTATGCC
TGCCATACTG GCGATGCAGT TAAAGCCCAC ATGGTGAGCA ACGGTGGCGA GATCAGCGTG
CCAGCCACTG GCGATTGGTT CAAGCAACCT ACGGGTGAAT CTTGTGCCGT GTGCCACAAC
ACAGGTAGCA GCTCTGGTAT CGACAAGTAC CATAACTTTA CCCGTAAATA A
 
Protein sequence
MRIFTSKKLA YLVAIALTGA LAGCGSDGKD GAPGQPGDPG QPGKPGDPWT PPPVTSSAVT 
NVKVLGYSFG EGSITYEFEV TDENGNLVNG LLNAEAKVAA LTDKGFINNR DEADINNVTD
NVHIGGAATQ ATEGAEIKSL GDGHYSFKAP MKGVNASTEG IVWLRVGGNS ESGIARSAPM
VVNKPEGTHS TTTDSCYACH VDYATSPRRH ASYVATGMDS EVTFVEGCLV CHGSVSRGAK
NAEGFSIGGY ATNTLSKIGH INHQKFTKDF SVMNCTSCHV EAPTNISVSG PGCIDCHNTG
GVPGAIVPSN GADVRPMHEG KEGITERQAI RAKYQVTLST PVKVDDISTL TDHYAPDGSS
VAKAEPGWCT TITVKDTDGN IFSIKDNFNY SDPLVFDAKK PIVYAGAYLH AYDNNTLVGR
PGNRTNYYYG YNTDGTKNIC HLLTDISAVN ANYAYSARVT FSTAGWMEYD GNQRYQSNGN
LRAKGYDGSM GVSFTAYSDV VNPVSAEKVS GFERRTVISD NSCTTCHNDA TAFHKNGAFD
QGGNGCIACH DNGMARTSAT LGAGFGPMIH SWHWGNGANV GEMKADGTQA KTANGAGAIN
PVTSCVACHE TAIDLNKVPN QYILEPGSKM TSPVTANCYA CHTGDAVKAH MVSNGGEISV
PATGDWFKQP TGESCAVCHN TGSSSGIDKY HNFTRK