Gene Shewana3_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1399 
Symbol 
ID4478996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1615512 
End bp1616141 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content49% 
IMG OID639725954 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_869039 
Protein GI117919847 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.272877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACGC TAAACACAAC CGCATTGCCT GATTATCAGA GCCAACACAA AAAGCGTCTG 
TCTTGGATGC CCTGGCTGTA TTTTTCACTC AAAGAAAAAC ACTTAGTCTG GGCTAAACCT
TGGCAGGATG AAATTCAAAC CAACCTTTGC GCCCTCGAAA CCGTCACCAT TGGTGATAAC
TGTTTTATCG CCCCCGAGGC ACAATTATTT GCTGAGCCCA ATCGCGATAT CAAGATAGGT
AATCATTGCA TGATTGCCGC CGAATGTTTT TTACATGGCC CTATTACCCT TGGTAACGAA
GTCGCCATCA ATCATGGCTG CTCCTTCGAT GGCGGTCGAG TGGGGATTCA AATTGGCTCC
CAAACTCGCA TTGCTAATCA TGTCACTATC TATGCCTTTA ATCATGGCAT GGCGCCCGAT
ACGCCCATTT ATCAACAAGC CTCCCACTCT AAAGGCGTCG TGATAGGTAA AGATGTTTGG
ATTGGCGCAC AGGCCGGGAT AGTTGATGGT GTCACCATTG GCGACCATGC GGTGATTGGC
ATGGGCTGTA TTGTCACCAA AGATGTCCCC GCATGGGCTA TCGTCGCCGG TAATCCTGCA
CGGGTGATTG GCGATCGGCG AAATAAGTAA
 
Protein sequence
MQTLNTTALP DYQSQHKKRL SWMPWLYFSL KEKHLVWAKP WQDEIQTNLC ALETVTIGDN 
CFIAPEAQLF AEPNRDIKIG NHCMIAAECF LHGPITLGNE VAINHGCSFD GGRVGIQIGS
QTRIANHVTI YAFNHGMAPD TPIYQQASHS KGVVIGKDVW IGAQAGIVDG VTIGDHAVIG
MGCIVTKDVP AWAIVAGNPA RVIGDRRNK