| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1398 |
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| Symbol | |
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| ID | 4478995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1613601 |
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| End bp | 1615313 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639725953 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_869038 |
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| Protein GI | 117919846 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.259821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.232568 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTTA GCAAATACCT ACTTTCTACT CAAAAAGAAA CACCTGCGAA TGCAGAAGTC
ATCAGCCATC AGTTAATGCT ACGTGCGGGT ATGATCCGCC GTAACGCTTC AGGTCTATAC
AGCTATCTGC CCACGGGCCT GCGTGTATTG CGTAAAGTCG AAGCCATTGT TCGTGAAGAA
ATGAACAAAG CGGGCGCGAT TGAAATCCTA ATGCCTATGG TGCAACCGGC TGATTTATGG
GTAGAAACGG GTCGCTGGGA CAAATTTGGT CCTGAACTAC TGCGTTTTAA AGACCGTCAT
AACCGTGACT TCGTGCTGGG GCCAACCCAC GAAGAAGTGA TCACCGACTT AATCCGTAAA
GAAGTCAGCT CTTACAAGCA ATTACCGCTG AATCTTTACC AAATCCAGAC CAAATTCCGT
GACGAAGTCC GCCCACGTTT CGGGGTGATG CGTTCGCGCG AATTCCTGAT GAAAGATGCG
TATTCTTTCC ATCTTGACGT GGATACCATG AATGAAACCT ATGAGGCCAT GTATCAAGCC
TATAGCAACA TTCTGTCGCG CATGGGCTTA GCCTTCCGCC CTGTTTTAGC GGACACAGGT
TCTATCGGTG GCAGCATGTC ACACGAGTTC CATGTATTGG CGCAAAGCGG TGAAGACTTA
ATCGCCTACT CTACTGGCAG CGACTATGCC GCTAACATCG AGAAAGCCGA ATCGCCAATG
CCAACCGAAG CGCGTGGCGC GGCAACAGAA GCATTACGTT TAGTCGATAC CCCAAATGCG
AAAACCATTG CCGAGTTAGT TGAGCAATTC GGTTTGGATA TCACTAAGAC AGTGAAAACC
TTGATTGTGA AAGGTGCGAC GGAAGAAGCA CCGCTGGTAG CGCTGATTGT ACGTGGCGAC
CACGAGCTGA ACGAAATCAA GGCAGACAAG CTAGATTTAG TGGCATCACC ATTAGAATTT
GCCCCAGAAG CCCTGATCCG TGATGCCATT GGCGCAGGTC CTGGCTCATT AGGTCCTGTC
GGCCTGAATA TGCCTGTCAT CATCGACCAC AGCGTTAGCG TAATGAGCGA CTTCGCCGCC
GGCGCAAACC TTGATGACAA ACACTACTTT GGCATCAACT GGGAGCGCGA TCTGCCTCTG
GCACAAGCAG CCGATATCCG TAACGTGGTT GAAGGCGAGC CAACACCTGA TGGTTTAGGT
ACTTACGCGA TGGCGCGTGG TATCGAAGTG GGTCATATCT TCCAACTCGG TACTAACTAT
TCTAAATCGA TGAATGCGAC TGTTCTCGAT GAGAACGGTA AATCACAAGT GCTGCTGATG
GGTTGTTACG GTGTGGGCGT GAGCCGTATC GTGGCGGCAG CCATTGAGCA AAACTTCGAT
GATCGCGGCA TTGTATGGCC AGAAGCCATT GCCCCATTCA GTGTAGGCAT TCTGCCAATG
AATATGCACA AATCACACCG CGTGACCGAT ATCGCCGAGC AGTTATACAA AGACTTAAGT
GCTGTGGGTA TCGATGTGCT ATTGGATGAC CGTAAAGAGC GCCCAGGCGT CATGTTCGCC
GATATGGAAC TGATTGGTAT TCCACACACT GTGGTGATTG GCGATCGCAA TATCGACGCT
GGCGTATTTG AATACAAAAA CCGCCGCACC GGTGAAAAGC AAGATGTGCC ATTCGACCAA
ATCGTCGATT TCTTAAAAAA TCTGCAAGCT TAA
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| Protein sequence | MRVSKYLLST QKETPANAEV ISHQLMLRAG MIRRNASGLY SYLPTGLRVL RKVEAIVREE
MNKAGAIEIL MPMVQPADLW VETGRWDKFG PELLRFKDRH NRDFVLGPTH EEVITDLIRK
EVSSYKQLPL NLYQIQTKFR DEVRPRFGVM RSREFLMKDA YSFHLDVDTM NETYEAMYQA
YSNILSRMGL AFRPVLADTG SIGGSMSHEF HVLAQSGEDL IAYSTGSDYA ANIEKAESPM
PTEARGAATE ALRLVDTPNA KTIAELVEQF GLDITKTVKT LIVKGATEEA PLVALIVRGD
HELNEIKADK LDLVASPLEF APEALIRDAI GAGPGSLGPV GLNMPVIIDH SVSVMSDFAA
GANLDDKHYF GINWERDLPL AQAADIRNVV EGEPTPDGLG TYAMARGIEV GHIFQLGTNY
SKSMNATVLD ENGKSQVLLM GCYGVGVSRI VAAAIEQNFD DRGIVWPEAI APFSVGILPM
NMHKSHRVTD IAEQLYKDLS AVGIDVLLDD RKERPGVMFA DMELIGIPHT VVIGDRNIDA
GVFEYKNRRT GEKQDVPFDQ IVDFLKNLQA
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