| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1392 |
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| Symbol | |
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| ID | 4478989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1607096 |
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| End bp | 1607632 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639725947 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_869032 |
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| Protein GI | 117919840 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0169683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGCA TTGAAACCGA GCTTGCAGAA GTATTGGTGT TCGAACCTCA AGTTTTTGGT
GATGAACGCG GTTTTTTTAT GGAAACCTTT AGACAATCGT TTTTCTCCGA GTGTTTGAAA
AGTAGAGGAT TAAAGGTGCA GGAGTTAGTC CAAGATAACT TTAGCCGATC ACAACAACAC
GTATTACGTG GCTTGCACTA CCAACGTGAG CATCCGCAGG GAAAGTTAGT TCGCGTGTGT
GCTGGCAGTA TTTTTGATGT CGCTGTGGAT ATTCGCCCGC AATCTAAAAC CTATGGTAAA
TGGGTAGGGC GTGTGCTCTC TGCTGATAAC CATTTGCAAA TGTGGATCCC GCCTAGCTTT
GCTCATGGAT TTTATGTGTT GAGTGAATAT GCCGATGTGC TTTATCGCTG CACTGATTAT
TACGCGCCAG ATGATGAATA TGTGCTGGCA TGGAATAGTG CCGAGTTTGC GATTGACTGG
CCGCTGCTAA ATGAAACGCC GATTCTGTCT GAAAGGGATG CTGCCGCTAG CGCCTAA
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| Protein sequence | MKCIETELAE VLVFEPQVFG DERGFFMETF RQSFFSECLK SRGLKVQELV QDNFSRSQQH
VLRGLHYQRE HPQGKLVRVC AGSIFDVAVD IRPQSKTYGK WVGRVLSADN HLQMWIPPSF
AHGFYVLSEY ADVLYRCTDY YAPDDEYVLA WNSAEFAIDW PLLNETPILS ERDAAASA
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