Gene Shewana3_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1383 
Symbol 
ID4478980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1598156 
End bp1599400 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content29% 
IMG OID639725938 
Producthypothetical protein 
Protein accessionYP_869023 
Protein GI117919831 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000336196 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTATATT TTTTAATTGT TTCAGTTATA ATTCTTAGAA TTACATTTTT AAAGTATTTT 
AATGGTTCTA GAAATATAGG TTACATTTTG CCTTTATTTT TAGAATTAAT TTTTATATAT
CCATTTTTTA TTGTAGATAT TCTTGGTTTG AAGTGGAGTA TTTATGGTTT TATAGTGTTA
TATAGTAGTA TACTCTCACT TCAAATAGGG TTACTCCCAT TGAAATCTCT TCCTAATAAT
CGAGTCAACG CGGTTGTTAT TAAGAAGAAA ATATTATTGA ATACGATTTA TATTTCAATT
CCATTTTACC TTGTCGGTGT TTTAAGTAAT TTTTCACTAT CTCAGCTTGC TGATTTTAGT
TTGTCAAATT ATTTAAGTAT TGCAAACTCT AGTGCGCTAG AGCGATATTC TGGAACTCAA
GTTCTAACTA TCCAGTACAA AATAGGTTCT ATTTTTTGCT ACTATGCAAT GTTTACTGTT
GGTTTTTTAG TTGGAACTAA GTCTGTTAAA TGTAATAGTA TAAAACATTA TTATTTTTTA
GCTGTATTAC TTTTTTTGAT TGCACTGCTT GACAGTTTTT TAATGGCTGC AAGAGCAGGA
ATGATGATGA TGTCATTTTG CTTTTTTTCA TCCTATTTCG TTACATCTCA ATACTTAAAG
TCTGGAAAGT TAATTGCAAT TTCGATTCCT ATTATATTCA AGTTGCTTTC TGTGTTTTTT
TTAATATTTG GTTTTTTTCT TGTTATACAG ATATTTCGTG GCGGAAAAGA AGATTATGAT
TTTTTAAATA TTGTTAATCA TCTTCTTACA TGGTTTATCG GCCATATTTC TGCATTTTCA
AATTGGATTG ATGCTTATGA TTTATACACA AAACCTAATT TAGGTTTTAG CACATTGGCT
GGTATATCCG ATTTAATAGG TGTTAAGGAG CGAGATTCAG GAATATACGT TGCGACCGAT
ATTGGTGAAG GACGTTTAAC AAATATATAT ACTAGCTTGA GGCCATTAAT TGAAGATTAT
TCAATATTGG GTGTTTTTGT TGTTTATACA ATATTTGGCC TGATTTTCTC ATTTTTTATT
AAGACTAAGC ATATGCAATT TAAGGGCGTT CTATTTATAT GCTGTGTTGG AATAACCGTG
TATTTGTGTT GGTCTTTTGT GACCAGTATT TTTGTGTACA ATACAATATT ATTTTCCTTT
TTTTGTTTTT CTCTAGCTTC ATTGTTTTTT GTTAAGTTTA AATGA
 
Protein sequence
MLYFLIVSVI ILRITFLKYF NGSRNIGYIL PLFLELIFIY PFFIVDILGL KWSIYGFIVL 
YSSILSLQIG LLPLKSLPNN RVNAVVIKKK ILLNTIYISI PFYLVGVLSN FSLSQLADFS
LSNYLSIANS SALERYSGTQ VLTIQYKIGS IFCYYAMFTV GFLVGTKSVK CNSIKHYYFL
AVLLFLIALL DSFLMAARAG MMMMSFCFFS SYFVTSQYLK SGKLIAISIP IIFKLLSVFF
LIFGFFLVIQ IFRGGKEDYD FLNIVNHLLT WFIGHISAFS NWIDAYDLYT KPNLGFSTLA
GISDLIGVKE RDSGIYVATD IGEGRLTNIY TSLRPLIEDY SILGVFVVYT IFGLIFSFFI
KTKHMQFKGV LFICCVGITV YLCWSFVTSI FVYNTILFSF FCFSLASLFF VKFK