Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1378 |
Symbol | |
ID | 4478286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1593660 |
End bp | 1594409 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639725933 |
Product | glycosyl transferase family protein |
Protein accession | YP_869018 |
Protein GI | 117919826 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.687728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000635475 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAGAGC AACCATTAGT ATCGATTATC ATGCCCAGCT ATAACTCAGC TAAAACTATT GCTGAAAGTA TAGAGTCAGT TATCTCTCAA ACATATCAAA ATTGGGAATT GTTAATTACA GATGATGTAT CTGTTGATAA TACTAGAGAT ATAGTACGCT CATATTGTGC TAAAGATAGT CGAATCAAGT TATTTGAGTT AGATGTAAAT TCTGGCGCAG GTGCTTCACG TAATAATAGT ATTGAAAATT CAAAAGGCAT TTATATTGCA TTTCTTGATT CTGATGACTT ATGGTTTTCA GATAAATTAT CCACCCAGAT TGCCTTTATG AAGTTAAATA ATGTTTTATT ATCGTACAGT GCATATCAGA AGTTTAGTCG TGAGGGAGAT GGAGGGGTAA TTATACCTCC AAGTTCAGTT ACTTATGAGG AATTGTTGAC GGGCAATGTA ATTGGTTGTT TAACTGCTAT ATATAACGCG AAAGTATTAG GTAAACGCTA TATGCCACTA ATACGGAAAA GACAAGATAT GGGCCTGTGG CTCAATATTT TAGAAGACAT CGATATGGCC TATGGTATTA GTGATGTTTT AGCTAAATAT CGTGTCGATA CAGGTATGAC AAAAAATAAA TTAAACATTT TGAAATGGCA GTGGGCTTTC TATCGAGATG TACTTGGTTT GAACTTTTTT AAAACGATTA AATGTTTTAT TTTATATGCC TATAAAGGCT TCTTGAAAAG TAGAATATGA
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Protein sequence | MQEQPLVSII MPSYNSAKTI AESIESVISQ TYQNWELLIT DDVSVDNTRD IVRSYCAKDS RIKLFELDVN SGAGASRNNS IENSKGIYIA FLDSDDLWFS DKLSTQIAFM KLNNVLLSYS AYQKFSREGD GGVIIPPSSV TYEELLTGNV IGCLTAIYNA KVLGKRYMPL IRKRQDMGLW LNILEDIDMA YGISDVLAKY RVDTGMTKNK LNILKWQWAF YRDVLGLNFF KTIKCFILYA YKGFLKSRI
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