| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1375 |
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| Symbol | |
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| ID | 4478283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1588920 |
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| End bp | 1591433 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639725930 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_869015 |
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| Protein GI | 117919823 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0193694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000028911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGTTACAAC AATTCAAAAA ATACATCAAA GCGGTTCCCA AAACCGCAAT ATTAGTAGGC
ATCACTGCCA CGATATTGAT GGGCACATCG GCGCAAGCTA TTACGCCCTC TCCGCAGATG
ATAGAACAAT TCAAACAACT ACCTAAGTCA GAGCAAGAAC GTTTAGCTCG CCAATACGGT
ATTGATCCGT CAATGATTAC GGGGTCCTCA ACTACTGCTA CTGTTGTTGA AAACCCAACT
GTAGTTACGC CACGAACGGA AACTGGTAAT AACGTCATCG ATCAATCTGA GGACGATAAA
CTTAACCAGG CAACCAAAAC GGAAGCTAAG GTTGAAGCGA TTGAAAGCAA AAAAGAAGAT
CAGCTAAAAC GCTTTGGCTA TGACTTATTT GCTGGTTCTC CAAGTACGTT TGCTCCCGTT
TCTGACGTAC CAGTGCCTGC TGAATACATG ATGGGCCCAG GTGATACCTT AAATGTGCAG
TTTTTTGGTA AAGAAAATAA TCAGTTCACG TTAACCGTGG GCCGTGATGG TGCAGTGCAA
TTCCCTAACT TGGGGCCTAT CTCACTAGTA GGCTTAACCT TTGCTGAAAC ACGCGAGCTA
TTACAACAAA AAATCAGCCA AAGCATGATA GGTATTGAGT CCAATATCAC TATGGGTGAG
TTGCGTTCAA TCCGGATTTT TGTGGCTGGT GATGCTTACA AACCTGGCTC TTACACTGTG
TCGAGTTTAT CGACCATTAC TCAAGCGCTG TTTATCTCGG GTGGCGTAAA CCAAATCGGT
AGCTTGCGTG ATATCCAATT AAAGCGCTCT GGTAAAACTA TTGGCCGTTT AGACTTATAT
GATTTATTGC TTCGCGGCGA TGCGTCAGGC GATATGCGTT TACAATCCGG TGATGTGGTA
TTTGTTCCAT CTACTGGGGG GACAGTGAGT GTTATAGGTG AAGTGCGTCG CCCTGCTATT
TACGAGCTTA AAAATAACGA AACCATGGCC GATGTGATTA ATATGGCTAG TGGTTTAAAC
CCAGGTGCAT ATCCCAAAGC CAGTACCATT GAACGTTATA GTCGTGAAGC GGTAAAAACC
GTGGTAAGTG TTGATTTAAC CGAAAATTCA GGCTTAAGTA CGTTAGCGAA AAATGGCGAT
TTACTTAATG TTCGCTCTGC TTCAAGCCGT ATTGATAATG CTATTACGGT CTCGGGTGCA
GTAATCCGCC CAGGTAAATA TCAATGGACA AATGGGCTAA CAGTTGCCGA TTTATTGCCT
TCCATTTGGG GGGATTTAAC CATCTCCGCA GATTTGGATT ACAGCTTATT GGTAAGAGAA
ATCAACCAAC GTGGTGATAT CGAAGTCGAG CGCATCAACC TCGGTCGCGC AATTGGTGAG
CCAAAATCAC ATTACAACCC CACACTAAAA CCACGAGATT CGGTCATTGT ATTTGACTAT
GCCGATCGTG AATCGCTGCT TAAGCCCATT ATTAAAAAGC TAAAAGAGCA AAGCCGTTTT
GGCGATGCCG CTAAACTGGT TAATATCAAT GGGAATGTAC GCTTCCCTGG TCAGTATCCA
ATAACGGTTA ATGCCGATGT TAAAGAGTTA CTTATAGCTG CAGGCGGGCT AGAAGAAGGT
GCATATACCC TATCAGCAGA GCTGACTCGT CAACAAGTGT CTGAGCAAAA TGGGGTTAAA
GTAGAACATG TACAGCTTAG CTTGGATCGC GTTATGCAAA ATGATCCGGC AGCCAATATC
AAACTGCAAA GCCGTGACAT CTTAACCGTA CGTACGTTGC CAGACTGGCA AGAAACTCGC
TGGGTCACCA TTAAAGGTGA AGTTAAATTC CCTGGCACTT ACAGTATCCA GCGCGGCGAA
ACCTTAAAAC AAGTGCTTGC CCGTGCTGGT GGTATGACGA GTGATGCTGC ACCACGCAGT
GCAGTCTTTT TACGCAAATC GATCCAACAA AAAGAACAGC AAGAACTTGC AAAGCTTGCC
GATGAATTGC GCCGGGAGAT TGCTGCAAAA GCCTTGACCA AAGATACGCC TACCATTGGT
TATAACGATG CACAAATGAT GTTAAATCAA TTGGAAAACG TTAAAACAGT TGGTCGCTTA
GTCGTCGATG TTAATGCGAT TGAATTAGGC ATCGAAAGTG CTGATTTAAT GTTGGAAGAT
TCTGATGCCT TATATGTTCC TGCTATAAAT CAAACAGTAT CAGTAATGGG GCAAGTGCAG
CATCCAAGTA CTCATCGCTT TAAAACTGGA TTAACGTTTG AACAATATCT AGCGTTATCC
GGCGGTCCAC GTAAACGTGC TGATGAATCT CGCACTTATA TATTAAAAGC TGATGGCTCG
GTACAAATGC CAGAATCTTC ATTGTGGTTT ACTGGCGGTA GCTCAATGGA ACCTGGTGAC
ACCATAGTTG TACCATTAGA TACCGAATAC AAAGATAATC TAACGTTGTG GACTCAAGTT
ACGAGCATTA TCTACAACAC CGCCGTCGCT GTATCCGCAA TATCGGGGAT TTAG
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| Protein sequence | MLQQFKKYIK AVPKTAILVG ITATILMGTS AQAITPSPQM IEQFKQLPKS EQERLARQYG
IDPSMITGSS TTATVVENPT VVTPRTETGN NVIDQSEDDK LNQATKTEAK VEAIESKKED
QLKRFGYDLF AGSPSTFAPV SDVPVPAEYM MGPGDTLNVQ FFGKENNQFT LTVGRDGAVQ
FPNLGPISLV GLTFAETREL LQQKISQSMI GIESNITMGE LRSIRIFVAG DAYKPGSYTV
SSLSTITQAL FISGGVNQIG SLRDIQLKRS GKTIGRLDLY DLLLRGDASG DMRLQSGDVV
FVPSTGGTVS VIGEVRRPAI YELKNNETMA DVINMASGLN PGAYPKASTI ERYSREAVKT
VVSVDLTENS GLSTLAKNGD LLNVRSASSR IDNAITVSGA VIRPGKYQWT NGLTVADLLP
SIWGDLTISA DLDYSLLVRE INQRGDIEVE RINLGRAIGE PKSHYNPTLK PRDSVIVFDY
ADRESLLKPI IKKLKEQSRF GDAAKLVNIN GNVRFPGQYP ITVNADVKEL LIAAGGLEEG
AYTLSAELTR QQVSEQNGVK VEHVQLSLDR VMQNDPAANI KLQSRDILTV RTLPDWQETR
WVTIKGEVKF PGTYSIQRGE TLKQVLARAG GMTSDAAPRS AVFLRKSIQQ KEQQELAKLA
DELRREIAAK ALTKDTPTIG YNDAQMMLNQ LENVKTVGRL VVDVNAIELG IESADLMLED
SDALYVPAIN QTVSVMGQVQ HPSTHRFKTG LTFEQYLALS GGPRKRADES RTYILKADGS
VQMPESSLWF TGGSSMEPGD TIVVPLDTEY KDNLTLWTQV TSIIYNTAVA VSAISGI
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