Gene Shewana3_1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1373 
Symbol 
ID4478281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1585825 
End bp1587294 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content47% 
IMG OID639725928 
Productamino acid/peptide transporter 
Protein accessionYP_869013 
Protein GI117919821 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3104] Dipeptide/tripeptide permease 
TIGRFAM ID[TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000302128 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000791426 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGTAG CAAAACCACA AGGGACGATG CTTGGTCATC CCAAGGGCCT GTTCCTTCTA 
TTTACAACAG AACTGTGGGA ACGTTTTAGT TATTACGCAA TGCGCGCCAT TTTGGTGCTG
TATTTAGTGG ACAAAGTGCA GAGTGAAGGG GGACACGGTT TAGGTTGGAC GCAAGCCGAT
GCGATTTCAC TCTATGGTAC ATTCACTGGC CTAGTTTACT TAACGCCGCT TATCGGTGGC
TGGTTAGCAG ACACCTTTTT AGGCCAACGC CGCGCGATTA TGATTGGCGG TACTTTAATG
GCCGCAGGTC AATTTATTCT CGGTACGCCG CACGCTTGGG TACCTGGTAT GGAAACCGAA
GTTTTCTATG TCGGCTTAGG AACCTTGATC TTAGGTAACG GCCTATTCAA GCCGAATATC
TCTACCATGG TAGGCGATCT GTACGAAGAA GGTGATCATC GCCGTGACGG TGCATTCACC
ATTTTCTATA TGGGGATCAA CGTCGGTGCT TTCCTATCGG GTATTATCGT AGGTTCTGTG
GTGGCGGCTT ATGATGGCAA CTTCCAAGCC GGCTTTATCT GTGCCGGTAT TGGTATGATC
CTGTCATTAA TCATCCAACT TGTGTTTGCG CAAAAGCTAC TTGGTGATAT CGGTAGAACC
CCAGCTGCTA AGCTTGAAAA GCAAAAAGCG GCAGAAAAAG GCGAAGTTCG CAAAGAGCCA
CTCACCAAAG TTGAGCGTGA CCGTATTAAA GTCATCATGG TGATGGGCTT ATTTACCATC
ATCTTCTGGG CGGGGTTTGA ACAAGCTGGC GGCTTGATGA ACCTGTTCAC GAATGACTTT
ACCGACCGTA TGATCGGTAC TTGGGAAGTT CCTACCACTT GGTTCCAATC CTTGAACGCG
ATGTTTATCG TGATTTTTGC ACCTGTTGTA GCCTCGATTT GGGTACGCTT AGGTAAGAAT
GAACCAAACT CGCCTGTTAA GTTTGCTTTA GGCTTAGTGC TATTAGCCGT TGGCTTCTTA
TTCATGATCG GTGCCGTTGT TGAGATGGGT GGCGATGCTT CAGCGAAATC GAGCATGTGG
TGGTTAGTCG GTGCTTATTT CTTCCACACC ATGGGTGAGC TTTGCTTATC ACCAATTGGT
TTATCTATGG TGACTAAGCT AGCCCCATTA CGTATAGCTT CATTAATGAT GGGTTCTTGG
TTCCTGTTCG TTGCTGCAGC TAACAAGATT GGTGGCGTAG TGGGTTCATT CATCGGCCAC
GGCGGTGAAA AAGAAGAACA ACTCGCCAAT GCAATGGCCA TTTTCTCGGG TATCGCGATT
ACTGCAGCAC TTTCTGGTGT GGTCTTATAC TTCATGGCCG ACAAACTTGT GGATTGGATG
CATGGTGCAG AAAGCAAGCA TCACAACGAA GCTGAAGCGT TAGAAGATGA AATCGCCGTT
ACCGGTGAGC ATGAAGCGAT CAAACGTTAA
 
Protein sequence
MSVAKPQGTM LGHPKGLFLL FTTELWERFS YYAMRAILVL YLVDKVQSEG GHGLGWTQAD 
AISLYGTFTG LVYLTPLIGG WLADTFLGQR RAIMIGGTLM AAGQFILGTP HAWVPGMETE
VFYVGLGTLI LGNGLFKPNI STMVGDLYEE GDHRRDGAFT IFYMGINVGA FLSGIIVGSV
VAAYDGNFQA GFICAGIGMI LSLIIQLVFA QKLLGDIGRT PAAKLEKQKA AEKGEVRKEP
LTKVERDRIK VIMVMGLFTI IFWAGFEQAG GLMNLFTNDF TDRMIGTWEV PTTWFQSLNA
MFIVIFAPVV ASIWVRLGKN EPNSPVKFAL GLVLLAVGFL FMIGAVVEMG GDASAKSSMW
WLVGAYFFHT MGELCLSPIG LSMVTKLAPL RIASLMMGSW FLFVAAANKI GGVVGSFIGH
GGEKEEQLAN AMAIFSGIAI TAALSGVVLY FMADKLVDWM HGAESKHHNE AEALEDEIAV
TGEHEAIKR